Protein Family : Small nuclear ribonucleoprotein family protein 122792948

Method ID:  5272 Method Name:  Eudicot
Sequence Alignment:  View MSA Member Count:  76

76 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29647.t000116 (1 of 1) K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) R. communis v0.1 2016   29647: 721960-723975
Cucsa.341710 (1 of 4) PTHR23338 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM C. sativus v1.0 3654   scaffold03356: 4110771-4114424
orange1.1g033530m.g (1 of 2) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs C. sinensis v1.1 2689   scaffold00022: 1283204-1285892
AT4G02840 (1 of 2) K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) A. thaliana TAIR10 1860   Chr4: 1264627-1266486
AT3G07590 (1 of 2) K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) A. thaliana TAIR10 1525   Chr3: 2423070-2424594
Thhalv10029079m.g (1 of 2) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs E. salsugineum v1.0 1849   scaffold_3: 1411423-1413271
Thhalv10005157m.g (1 of 2) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs E. salsugineum v1.0 955   scaffold_6: 5060362-5061316
Ciclev10022934m.g (1 of 2) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs C. clementina v1.0 2781   scaffold_3: 44708642-44711422
Lus10028022.g (1 of 4) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs L. usitatissimum v1.0 2361   scaffold132: 373746-376106
Gorai.004G215800 (1 of 6) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs G. raimondii v2.1 2052   Chr04: 54861340-54863391
Gorai.008G005000 (1 of 6) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs G. raimondii v2.1 2344   Chr08: 693081-695424
Gorai.007G135700 (1 of 6) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs G. raimondii v2.1 2679   Chr07: 11077332-11080010
Gorai.007G163800 (1 of 6) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs G. raimondii v2.1 2750   Chr07: 14327311-14330060
Thecc1EG046691 (1 of 1) K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) T. cacao v1.1 2417   scaffold_1: 31522882-31525298
Migut.D00283 (1 of 3) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs M. guttatus v2.0 3283   scaffold_4: 1280629-1283911
Migut.M01594 (1 of 3) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs M. guttatus v2.0 1694   scaffold_13: 19229088-19230781
Migut.O00722 (1 of 3) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs M. guttatus v2.0 2563   scaffold_1487: 4174-6736
Araha.1135s0001 (1 of 3) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs A. halleri v1.1 1892   Scaffold1135: 409-2300
Araha.4706s0018 (1 of 3) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs A. halleri v1.1 1062   Scaffold4706: 60965-62026
Araha.5052s0016 (1 of 3) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs A. halleri v1.1 1589   Scaffold5052: 65790-67378
Cagra.0133s0105 (1 of 2) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs C. grandiflora v1.1 1151   Scaffold133: 385456-386606
Cagra.8967s0006 (1 of 2) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs C. grandiflora v1.1 1734   Scaffold8967: 20700-22433
Glyma.18G285500 (1 of 10) PTHR23338 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM G. max Wm82.a2.v1 2310   Chr18: 56580082-56582391
Glyma.02G096000 (1 of 10) PTHR23338 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM G. max Wm82.a2.v1 2315   Chr02: 8653741-8656055
Glyma.03G152100 (1 of 10) PTHR23338 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM G. max Wm82.a2.v1 3116   Chr03: 36714161-36717276
Glyma.19G154600 (1 of 10) PTHR23338 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM G. max Wm82.a2.v1 4153   Chr19: 41497913-41502065
Brara.A03600 (1 of 4) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs B. rapa FPsc v1.3 1008   A01: 29095565-29096572
Brara.C02788 (1 of 4) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs B. rapa FPsc v1.3 1201   A03: 14286563-14287763
Brara.E03190 (1 of 4) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs B. rapa FPsc v1.3 991   A05: 26068218-26069208
Brara.C03219 (1 of 4) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs B. rapa FPsc v1.3 865   A03: 16318507-16319371

76 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Cucsa.341710.1 C. sativus v1.0 122792948 Small nuclear ribonucleoprotein family protein 1 5272 Eudicot
orange1.1g033530m C. sinensis v1.1 122792948 Small nuclear ribonucleoprotein family protein 1 5272 Eudicot
AT3G07590.1 A. thaliana TAIR10 122792948 Small nuclear ribonucleoprotein family protein 2 5272 Eudicot
Ciclev10022934m C. clementina v1.0 122792948 Small nuclear ribonucleoprotein family protein 1 5272 Eudicot
Gorai.004G215800.1 G. raimondii v2.1 122792948 Small nuclear ribonucleoprotein family protein 4 5272 Eudicot
Gorai.008G005000.1 G. raimondii v2.1 122792948 Small nuclear ribonucleoprotein family protein 4 5272 Eudicot
Cagra.8967s0006.1.p C. grandiflora v1.1 122792948 Small nuclear ribonucleoprotein family protein 2 5272 Eudicot
Glyma.02G096000.1.p G. max Wm82.a2.v1 122792948 Small nuclear ribonucleoprotein family protein 4 5272 Eudicot
Glyma.19G154600.1.p G. max Wm82.a2.v1 122792948 Small nuclear ribonucleoprotein family protein 4 5272 Eudicot
Glyma.03G152100.1.p G. max Wm82.a2.v1 122792948 Small nuclear ribonucleoprotein family protein 4 5272 Eudicot
Bostr.22252s0269.1.p B. stricta v1.2 122792948 Small nuclear ribonucleoprotein family protein 2 5272 Eudicot
Bostr.2983s0164.1.p B. stricta v1.2 122792948 Small nuclear ribonucleoprotein family protein 2 5272 Eudicot
Medtr7g094680.1 M. truncatula Mt4.0v1 122792948 Small nuclear ribonucleoprotein family protein 2 5272 Eudicot
SapurV1A.0289s0200.1.p S. purpurea v1.0 122792948 Small nuclear ribonucleoprotein family protein 2 5272 Eudicot
Eucgr.K03379.1.p E. grandis v2.0 122792948 Small nuclear ribonucleoprotein family protein 1 5272 Eudicot
Prupe.8G242900.1.p P. persica v2.1 122792948 Small nuclear ribonucleoprotein family protein 1 5272 Eudicot
Manes.01G208900.1.p M. esculenta v6.1 122792948 Small nuclear ribonucleoprotein family protein 2 5272 Eudicot
Kalax.0513s0009.1.p K. laxiflora v1.1 122792948 Small nuclear ribonucleoprotein family protein 6 5272 Eudicot
Kalax.0046s0106.1.p K. laxiflora v1.1 122792948 Small nuclear ribonucleoprotein family protein 6 5272 Eudicot
Kalax.0149s0032.1.p K. laxiflora v1.1 122792948 Small nuclear ribonucleoprotein family protein 6 5272 Eudicot
Kalax.0238s0004.1.p K. laxiflora v1.1 122792948 Small nuclear ribonucleoprotein family protein 6 5272 Eudicot
Aqcoe6G205700.1.p A. coerulea v3.1 122792948 Small nuclear ribonucleoprotein family protein 1 5272 Eudicot
Kaladp0076s0358.1.p K. fedtschenkoi v1.1 122792948 Small nuclear ribonucleoprotein family protein 3 5272 Eudicot
Kaladp0008s0285.1.p K. fedtschenkoi v1.1 122792948 Small nuclear ribonucleoprotein family protein 3 5272 Eudicot
Kaladp0051s0036.1.p K. fedtschenkoi v1.1 122792948 Small nuclear ribonucleoprotein family protein 3 5272 Eudicot
AL1G12710.t1 A. lyrata v2.1 122792948 Small nuclear ribonucleoprotein family protein 3 5272 Eudicot
AL3G18950.t1 A. lyrata v2.1 122792948 Small nuclear ribonucleoprotein family protein 3 5272 Eudicot
Tp57577_TGAC_v2_mRNA6395 T. pratense v2 122792948 Small nuclear ribonucleoprotein family protein 2 5272 Eudicot
Phvul.001G149700.1.p P. vulgaris v2.1 122792948 Small nuclear ribonucleoprotein family protein 2 5272 Eudicot
Potri.002G054800.1.p P. trichocarpa v3.1 122792948 Small nuclear ribonucleoprotein family protein 1 5272 Eudicot