Gene : Glyma.19G154600 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR23338 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM Genomic Order:  1546
Name:  ? Glyma.19G154600 Secondary Identifier:  ? PAC:30513778
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G154600 0.5kb upstream 0.5kb upstream 4653 true Chr19: 41497413-41502065 Glycine max
Glyma.19G154600 0.5kb upstream 0.5kb upstream 500 false Chr19: 41497413-41497912 Glycine max
Glyma.19G154600 0.5kb downstream 0.5kb downstream 4653 true Chr19: 41497913-41502565 Glycine max
Glyma.19G154600 0.5kb downstream 0.5kb downstream 500 false Chr19: 41502066-41502565 Glycine max
Glyma.19G154600 1.0kb upstream 1.0kb upstream 5153 true Chr19: 41496913-41502065 Glycine max
Glyma.19G154600 1.0kb upstream 1.0kb upstream 1000 false Chr19: 41496913-41497912 Glycine max
Glyma.19G154600 1.0kb downstream 1.0kb downstream 5153 true Chr19: 41497913-41503065 Glycine max
Glyma.19G154600 1.0kb downstream 1.0kb downstream 1000 false Chr19: 41502066-41503065 Glycine max
Glyma.19G154600 2.0kb upstream 2.0kb upstream 6153 true Chr19: 41495913-41502065 Glycine max
Glyma.19G154600 2.0kb upstream 2.0kb upstream 2000 false Chr19: 41495913-41497912 Glycine max
Glyma.19G154600 2.0kb downstream 2.0kb downstream 6153 true Chr19: 41497913-41504065 Glycine max
Glyma.19G154600 2.0kb downstream 2.0kb downstream 2000 false Chr19: 41502066-41504065 Glycine max
Glyma.19G154600 5.0kb upstream 5.0kb upstream 9153 true Chr19: 41492913-41502065 Glycine max
Glyma.19G154600 5.0kb upstream 5.0kb upstream 5000 false Chr19: 41492913-41497912 Glycine max
Glyma.19G154600 5.0kb downstream 5.0kb downstream 9153 true Chr19: 41497913-41507065 Glycine max
Glyma.19G154600 5.0kb downstream 5.0kb downstream 5000 false Chr19: 41502066-41507065 Glycine max
Glyma.19G154600 10.0kb upstream 10.0kb upstream 14153 true Chr19: 41487913-41502065 Glycine max
Glyma.19G154600 10.0kb upstream 10.0kb upstream 10000 false Chr19: 41487913-41497912 Glycine max
Glyma.19G154600 10.0kb downstream 10.0kb downstream 14153 true Chr19: 41497913-41512065 Glycine max
Glyma.19G154600 10.0kb downstream 10.0kb downstream 10000 false Chr19: 41502066-41512065 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314520 5265 Fabidae View MSA
124060560 5270 Rosid View MSA
123750770 5271 Pentapetalae View MSA
122792948 5272 Eudicot View MSA
122045867 5273 Angiosperm View MSA
121351003 5274 Embryophyte View MSA
123426098 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.852 0.0 88.1175 High  
cufflinks 41.7941 0.0 111.55 High  
cufflinks 23.4028 0.0 63.8575 High Low
cufflinks 20.8526 0.0 57.3545 High Low
cufflinks 41.3345 0.0 110.314 High  
cufflinks 35.4917 0.0 94.9794 High  
cufflinks 53.2425 0.0 142.219 High High
cufflinks 29.5917 0.0 79.6254 High  
cufflinks 35.1726 0.0 94.1367 High  
cufflinks 1.686        
cufflinks 1.153       Low
cufflinks 2.359        
cufflinks 3.415        
cufflinks 4.636       High
cufflinks 1.053       Low
cufflinks 3.852       High
cufflinks 1.954        
cufflinks 2.627        
cufflinks 3.052        
cufflinks 3.281        
cufflinks 1.465       Low
cufflinks 3.609        
cufflinks 3.207        
cufflinks 1.411       Low
cufflinks 3.529        
cufflinks 2.399        

0 Strain