Gene : Araha.5052s0016 A. halleri v1.1
Defline:  (1 of 3) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs Genomic Order:  16
Name:  ? Araha.5052s0016 Secondary Identifier:  ? PAC:28854092
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5052s0016 0.5kb upstream 0.5kb upstream 2089 true Scaffold5052: 65790-67878 Arabidopsis halleri
Araha.5052s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold5052: 67379-67878 Arabidopsis halleri
Araha.5052s0016 0.5kb downstream 0.5kb downstream 2089 true Scaffold5052: 65290-67378 Arabidopsis halleri
Araha.5052s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold5052: 65290-65789 Arabidopsis halleri
Araha.5052s0016 1.0kb upstream 1.0kb upstream 2589 true Scaffold5052: 65790-68378 Arabidopsis halleri
Araha.5052s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold5052: 67379-68378 Arabidopsis halleri
Araha.5052s0016 1.0kb downstream 1.0kb downstream 2589 true Scaffold5052: 64790-67378 Arabidopsis halleri
Araha.5052s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold5052: 64790-65789 Arabidopsis halleri
Araha.5052s0016 2.0kb upstream 2.0kb upstream 3589 true Scaffold5052: 65790-69378 Arabidopsis halleri
Araha.5052s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold5052: 67379-69378 Arabidopsis halleri
Araha.5052s0016 2.0kb downstream 2.0kb downstream 3589 true Scaffold5052: 63790-67378 Arabidopsis halleri
Araha.5052s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold5052: 63790-65789 Arabidopsis halleri
Araha.5052s0016 5.0kb upstream 5.0kb upstream 6589 true Scaffold5052: 65790-72378 Arabidopsis halleri
Araha.5052s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold5052: 67379-72378 Arabidopsis halleri
Araha.5052s0016 5.0kb downstream 5.0kb downstream 6589 true Scaffold5052: 60790-67378 Arabidopsis halleri
Araha.5052s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold5052: 60790-65789 Arabidopsis halleri
Araha.5052s0016 10.0kb upstream 10.0kb upstream 11589 true Scaffold5052: 65790-77378 Arabidopsis halleri
Araha.5052s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold5052: 67379-77378 Arabidopsis halleri
Araha.5052s0016 10.0kb downstream 10.0kb downstream 11589 true Scaffold5052: 55790-67378 Arabidopsis halleri
Araha.5052s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold5052: 55790-65789 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362948 5261 Brassicaceae View MSA
123839137 5264 Brassicales-Malvales View MSA
124351091 5266 SBM View MSA
124247132 5268 Malvidae View MSA
124060560 5270 Rosid View MSA
123750770 5271 Pentapetalae View MSA
122792948 5272 Eudicot View MSA
122045867 5273 Angiosperm View MSA
121351003 5274 Embryophyte View MSA
123426098 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain