Protein Family : Small nuclear ribonucleoprotein family protein 124247132

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  34

34 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29647.t000116 (1 of 1) K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) R. communis v0.1 2016   29647: 721960-723975
orange1.1g033530m.g (1 of 2) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs C. sinensis v1.1 2689   scaffold00022: 1283204-1285892
AT4G02840 (1 of 2) K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) A. thaliana TAIR10 1860   Chr4: 1264627-1266486
AT3G07590 (1 of 2) K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) A. thaliana TAIR10 1525   Chr3: 2423070-2424594
Thhalv10029079m.g (1 of 2) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs E. salsugineum v1.0 1849   scaffold_3: 1411423-1413271
Thhalv10005157m.g (1 of 2) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs E. salsugineum v1.0 955   scaffold_6: 5060362-5061316
Ciclev10022934m.g (1 of 2) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs C. clementina v1.0 2781   scaffold_3: 44708642-44711422
Lus10028022.g (1 of 4) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs L. usitatissimum v1.0 2361   scaffold132: 373746-376106
Gorai.004G215800 (1 of 6) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs G. raimondii v2.1 2052   Chr04: 54861340-54863391
Gorai.008G005000 (1 of 6) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs G. raimondii v2.1 2344   Chr08: 693081-695424
Gorai.007G135700 (1 of 6) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs G. raimondii v2.1 2679   Chr07: 11077332-11080010
Araha.1135s0001 (1 of 3) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs A. halleri v1.1 1892   Scaffold1135: 409-2300
Araha.4706s0018 (1 of 3) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs A. halleri v1.1 1062   Scaffold4706: 60965-62026
Araha.5052s0016 (1 of 3) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs A. halleri v1.1 1589   Scaffold5052: 65790-67378
Cagra.0133s0105 (1 of 2) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs C. grandiflora v1.1 1151   Scaffold133: 385456-386606
Cagra.8967s0006 (1 of 2) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs C. grandiflora v1.1 1734   Scaffold8967: 20700-22433
Brara.A03600 (1 of 4) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs B. rapa FPsc v1.3 1008   A01: 29095565-29096572
Brara.C02788 (1 of 4) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs B. rapa FPsc v1.3 1201   A03: 14286563-14287763
Brara.E03190 (1 of 4) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs B. rapa FPsc v1.3 991   A05: 26068218-26069208
Brara.C03219 (1 of 4) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs B. rapa FPsc v1.3 865   A03: 16318507-16319371
Bostr.2983s0164 (1 of 3) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs B. stricta v1.2 2343   Scaffold2983: 1006561-1008903
Bostr.22252s0269 (1 of 3) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs B. stricta v1.2 1147   Scaffold22252: 1187780-1188926
SapurV1A.0289s0200 (1 of 2) K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) S. purpurea v1.0 2695   chr02: 3710906-3713600
SapurV1A.0076s0290 (1 of 2) K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) S. purpurea v1.0 2050   chr05: 17723021-17725070
Manes.05G075000 (1 of 4) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs M. esculenta v6.1 4611   Chromosome05: 5675359-5679969
Manes.01G208900 (1 of 4) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs M. esculenta v6.1 2983   Chromosome01: 30026569-30029551
AL3G18950 (1 of 3) K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) A. lyrata v2.1 1045   scaffold_3: 3196255-3197299
AL6G50090 (1 of 3) K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) A. lyrata v2.1 1985   scaffold_6: 23417281-23419265
AL1G12710 (1 of 3) K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) A. lyrata v2.1 1538   scaffold_1: 941282-942819
Potri.002G054800 (1 of 1) K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) P. trichocarpa v3.1 3070   Chr02: 3647932-3651001

34 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
AT3G07590.1 A. thaliana TAIR10 124247132 Small nuclear ribonucleoprotein family protein 2 5268 Malvidae
Ciclev10022934m C. clementina v1.0 124247132 Small nuclear ribonucleoprotein family protein 1 5268 Malvidae
Gorai.004G215800.1 G. raimondii v2.1 124247132 Small nuclear ribonucleoprotein family protein 3 5268 Malvidae
Gorai.008G005000.1 G. raimondii v2.1 124247132 Small nuclear ribonucleoprotein family protein 3 5268 Malvidae
Cagra.8967s0006.1.p C. grandiflora v1.1 124247132 Small nuclear ribonucleoprotein family protein 2 5268 Malvidae
Bostr.22252s0269.1.p B. stricta v1.2 124247132 Small nuclear ribonucleoprotein family protein 2 5268 Malvidae
Bostr.2983s0164.1.p B. stricta v1.2 124247132 Small nuclear ribonucleoprotein family protein 2 5268 Malvidae
SapurV1A.0289s0200.1.p S. purpurea v1.0 124247132 Small nuclear ribonucleoprotein family protein 2 5268 Malvidae
Manes.01G208900.1.p M. esculenta v6.1 124247132 Small nuclear ribonucleoprotein family protein 2 5268 Malvidae
AL1G12710.t1 A. lyrata v2.1 124247132 Small nuclear ribonucleoprotein family protein 3 5268 Malvidae
AL3G18950.t1 A. lyrata v2.1 124247132 Small nuclear ribonucleoprotein family protein 3 5268 Malvidae
Potri.002G054800.1.p P. trichocarpa v3.1 124247132 Small nuclear ribonucleoprotein family protein 1 5268 Malvidae
Carub.0006s3421.1.p C. rubella v1.1 124247132 Small nuclear ribonucleoprotein family protein 2 5268 Malvidae
29647.m002108 R. communis v0.1 124247132 Small nuclear ribonucleoprotein family protein 1 5268 Malvidae
orange1.1g033530m C. sinensis v1.1 124247132 Small nuclear ribonucleoprotein family protein 1 5268 Malvidae
AT4G02840.2 A. thaliana TAIR10 124247132 Small nuclear ribonucleoprotein family protein 2 5268 Malvidae
Thhalv10029079m E. salsugineum v1.0 124247132 Small nuclear ribonucleoprotein family protein 2 5268 Malvidae
Thhalv10005157m E. salsugineum v1.0 124247132 Small nuclear ribonucleoprotein family protein 2 5268 Malvidae
Lus10028022 L. usitatissimum v1.0 124247132 Small nuclear ribonucleoprotein family protein 1 5268 Malvidae
Gorai.007G135700.1 G. raimondii v2.1 124247132 Small nuclear ribonucleoprotein family protein 3 5268 Malvidae
Araha.5052s0016.1.p A. halleri v1.1 124247132 Small nuclear ribonucleoprotein family protein 3 5268 Malvidae
Araha.4706s0018.1.p A. halleri v1.1 124247132 Small nuclear ribonucleoprotein family protein 3 5268 Malvidae
Araha.1135s0001.1.p A. halleri v1.1 124247132 Small nuclear ribonucleoprotein family protein 3 5268 Malvidae
Cagra.0133s0105.1.p C. grandiflora v1.1 124247132 Small nuclear ribonucleoprotein family protein 2 5268 Malvidae
Brara.C02788.1.p B. rapa FPsc v1.3 124247132 Small nuclear ribonucleoprotein family protein 4 5268 Malvidae
Brara.E03190.1.p B. rapa FPsc v1.3 124247132 Small nuclear ribonucleoprotein family protein 4 5268 Malvidae
Brara.A03600.1.p B. rapa FPsc v1.3 124247132 Small nuclear ribonucleoprotein family protein 4 5268 Malvidae
Brara.C03219.1.p B. rapa FPsc v1.3 124247132 Small nuclear ribonucleoprotein family protein 4 5268 Malvidae
SapurV1A.0076s0290.1.p S. purpurea v1.0 124247132 Small nuclear ribonucleoprotein family protein 2 5268 Malvidae
Manes.05G075000.1.p M. esculenta v6.1 124247132 Small nuclear ribonucleoprotein family protein 2 5268 Malvidae