Gene : Thhalv10029079m.g E. salsugineum v1.0
Defline:  (1 of 2) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs Genomic Order:  286
Name:  ? Thhalv10029079m.g Secondary Identifier:  ? PAC:20197829
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10029079m.g 0.5kb upstream 0.5kb upstream 2349 true scaffold_3: 1410923-1413271 Eutrema salsugineum
Thhalv10029079m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1410923-1411422 Eutrema salsugineum
Thhalv10029079m.g 0.5kb downstream 0.5kb downstream 2349 true scaffold_3: 1411423-1413771 Eutrema salsugineum
Thhalv10029079m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1413272-1413771 Eutrema salsugineum
Thhalv10029079m.g 1.0kb upstream 1.0kb upstream 2849 true scaffold_3: 1410423-1413271 Eutrema salsugineum
Thhalv10029079m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1410423-1411422 Eutrema salsugineum
Thhalv10029079m.g 1.0kb downstream 1.0kb downstream 2849 true scaffold_3: 1411423-1414271 Eutrema salsugineum
Thhalv10029079m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1413272-1414271 Eutrema salsugineum
Thhalv10029079m.g 2.0kb upstream 2.0kb upstream 3849 true scaffold_3: 1409423-1413271 Eutrema salsugineum
Thhalv10029079m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1409423-1411422 Eutrema salsugineum
Thhalv10029079m.g 2.0kb downstream 2.0kb downstream 3849 true scaffold_3: 1411423-1415271 Eutrema salsugineum
Thhalv10029079m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1413272-1415271 Eutrema salsugineum
Thhalv10029079m.g 5.0kb upstream 5.0kb upstream 6849 true scaffold_3: 1406423-1413271 Eutrema salsugineum
Thhalv10029079m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1406423-1411422 Eutrema salsugineum
Thhalv10029079m.g 5.0kb downstream 5.0kb downstream 6849 true scaffold_3: 1411423-1418271 Eutrema salsugineum
Thhalv10029079m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1413272-1418271 Eutrema salsugineum
Thhalv10029079m.g 10.0kb upstream 10.0kb upstream 11849 true scaffold_3: 1401423-1413271 Eutrema salsugineum
Thhalv10029079m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1401423-1411422 Eutrema salsugineum
Thhalv10029079m.g 10.0kb downstream 10.0kb downstream 11849 true scaffold_3: 1411423-1423271 Eutrema salsugineum
Thhalv10029079m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1413272-1423271 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362948 5261 Brassicaceae View MSA
123839137 5264 Brassicales-Malvales View MSA
124351091 5266 SBM View MSA
124247132 5268 Malvidae View MSA
124060560 5270 Rosid View MSA
123750770 5271 Pentapetalae View MSA
122792948 5272 Eudicot View MSA
122045867 5273 Angiosperm View MSA
121351003 5274 Embryophyte View MSA
123426098 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain