Gene : Gorai.004G215800 G. raimondii v2.1
Defline:  (1 of 6) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs Genomic Order:  2158
Name:  ? Gorai.004G215800 Secondary Identifier:  ? PAC:26772958
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G215800 0.5kb upstream 0.5kb upstream 2552 true Chr04: 54860840-54863391 Gossypium raimondii
Gorai.004G215800 0.5kb upstream 0.5kb upstream 500 false Chr04: 54860840-54861339 Gossypium raimondii
Gorai.004G215800 0.5kb downstream 0.5kb downstream 2552 true Chr04: 54861340-54863891 Gossypium raimondii
Gorai.004G215800 0.5kb downstream 0.5kb downstream 500 false Chr04: 54863392-54863891 Gossypium raimondii
Gorai.004G215800 1.0kb upstream 1.0kb upstream 3052 true Chr04: 54860340-54863391 Gossypium raimondii
Gorai.004G215800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 54860340-54861339 Gossypium raimondii
Gorai.004G215800 1.0kb downstream 1.0kb downstream 3052 true Chr04: 54861340-54864391 Gossypium raimondii
Gorai.004G215800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 54863392-54864391 Gossypium raimondii
Gorai.004G215800 2.0kb upstream 2.0kb upstream 4052 true Chr04: 54859340-54863391 Gossypium raimondii
Gorai.004G215800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 54859340-54861339 Gossypium raimondii
Gorai.004G215800 2.0kb downstream 2.0kb downstream 4052 true Chr04: 54861340-54865391 Gossypium raimondii
Gorai.004G215800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 54863392-54865391 Gossypium raimondii
Gorai.004G215800 5.0kb upstream 5.0kb upstream 7052 true Chr04: 54856340-54863391 Gossypium raimondii
Gorai.004G215800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 54856340-54861339 Gossypium raimondii
Gorai.004G215800 5.0kb downstream 5.0kb downstream 7052 true Chr04: 54861340-54868391 Gossypium raimondii
Gorai.004G215800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 54863392-54868391 Gossypium raimondii
Gorai.004G215800 10.0kb upstream 10.0kb upstream 12052 true Chr04: 54851340-54863391 Gossypium raimondii
Gorai.004G215800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 54851340-54861339 Gossypium raimondii
Gorai.004G215800 10.0kb downstream 10.0kb downstream 12052 true Chr04: 54861340-54873391 Gossypium raimondii
Gorai.004G215800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 54863392-54873391 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839137 5264 Brassicales-Malvales View MSA
124351091 5266 SBM View MSA
124247132 5268 Malvidae View MSA
124060560 5270 Rosid View MSA
123750770 5271 Pentapetalae View MSA
122792948 5272 Eudicot View MSA
122045867 5273 Angiosperm View MSA
121351003 5274 Embryophyte View MSA
123426098 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain