Gene : orange1.1g033530m.g C. sinensis v1.1
Defline:  (1 of 2) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs Genomic Order:  161
Name:  ? orange1.1g033530m.g Secondary Identifier:  ? PAC:18093359
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g033530m.g 0.5kb upstream 0.5kb upstream 3189 true scaffold00022: 1283204-1286392 Citrus sinensis
orange1.1g033530m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00022: 1285893-1286392 Citrus sinensis
orange1.1g033530m.g 0.5kb downstream 0.5kb downstream 3189 true scaffold00022: 1282704-1285892 Citrus sinensis
orange1.1g033530m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00022: 1282704-1283203 Citrus sinensis
orange1.1g033530m.g 1.0kb upstream 1.0kb upstream 3689 true scaffold00022: 1283204-1286892 Citrus sinensis
orange1.1g033530m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00022: 1285893-1286892 Citrus sinensis
orange1.1g033530m.g 1.0kb downstream 1.0kb downstream 3689 true scaffold00022: 1282204-1285892 Citrus sinensis
orange1.1g033530m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00022: 1282204-1283203 Citrus sinensis
orange1.1g033530m.g 2.0kb upstream 2.0kb upstream 4689 true scaffold00022: 1283204-1287892 Citrus sinensis
orange1.1g033530m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00022: 1285893-1287892 Citrus sinensis
orange1.1g033530m.g 2.0kb downstream 2.0kb downstream 4689 true scaffold00022: 1281204-1285892 Citrus sinensis
orange1.1g033530m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00022: 1281204-1283203 Citrus sinensis
orange1.1g033530m.g 5.0kb upstream 5.0kb upstream 7689 true scaffold00022: 1283204-1290892 Citrus sinensis
orange1.1g033530m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00022: 1285893-1290892 Citrus sinensis
orange1.1g033530m.g 5.0kb downstream 5.0kb downstream 7689 true scaffold00022: 1278204-1285892 Citrus sinensis
orange1.1g033530m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00022: 1278204-1283203 Citrus sinensis
orange1.1g033530m.g 10.0kb upstream 10.0kb upstream 12689 true scaffold00022: 1283204-1295892 Citrus sinensis
orange1.1g033530m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00022: 1285893-1295892 Citrus sinensis
orange1.1g033530m.g 10.0kb downstream 10.0kb downstream 12689 true scaffold00022: 1273204-1285892 Citrus sinensis
orange1.1g033530m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00022: 1273204-1283203 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124351091 5266 SBM View MSA
124247132 5268 Malvidae View MSA
124060560 5270 Rosid View MSA
123750770 5271 Pentapetalae View MSA
122792948 5272 Eudicot View MSA
122045867 5273 Angiosperm View MSA
121351003 5274 Embryophyte View MSA
123426098 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain