Gene : Gorai.007G135700 G. raimondii v2.1
Defline:  (1 of 6) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs Genomic Order:  1357
Name:  ? Gorai.007G135700 Secondary Identifier:  ? PAC:26780438
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.007G135700 0.5kb upstream 0.5kb upstream 3179 true Chr07: 11076832-11080010 Gossypium raimondii
Gorai.007G135700 0.5kb upstream 0.5kb upstream 500 false Chr07: 11076832-11077331 Gossypium raimondii
Gorai.007G135700 0.5kb downstream 0.5kb downstream 3179 true Chr07: 11077332-11080510 Gossypium raimondii
Gorai.007G135700 0.5kb downstream 0.5kb downstream 500 false Chr07: 11080011-11080510 Gossypium raimondii
Gorai.007G135700 1.0kb upstream 1.0kb upstream 3679 true Chr07: 11076332-11080010 Gossypium raimondii
Gorai.007G135700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 11076332-11077331 Gossypium raimondii
Gorai.007G135700 1.0kb downstream 1.0kb downstream 3679 true Chr07: 11077332-11081010 Gossypium raimondii
Gorai.007G135700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 11080011-11081010 Gossypium raimondii
Gorai.007G135700 2.0kb upstream 2.0kb upstream 4679 true Chr07: 11075332-11080010 Gossypium raimondii
Gorai.007G135700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 11075332-11077331 Gossypium raimondii
Gorai.007G135700 2.0kb downstream 2.0kb downstream 4679 true Chr07: 11077332-11082010 Gossypium raimondii
Gorai.007G135700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 11080011-11082010 Gossypium raimondii
Gorai.007G135700 5.0kb upstream 5.0kb upstream 7679 true Chr07: 11072332-11080010 Gossypium raimondii
Gorai.007G135700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 11072332-11077331 Gossypium raimondii
Gorai.007G135700 5.0kb downstream 5.0kb downstream 7679 true Chr07: 11077332-11085010 Gossypium raimondii
Gorai.007G135700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 11080011-11085010 Gossypium raimondii
Gorai.007G135700 10.0kb upstream 10.0kb upstream 12679 true Chr07: 11067332-11080010 Gossypium raimondii
Gorai.007G135700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 11067332-11077331 Gossypium raimondii
Gorai.007G135700 10.0kb downstream 10.0kb downstream 12679 true Chr07: 11077332-11090010 Gossypium raimondii
Gorai.007G135700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 11080011-11090010 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839137 5264 Brassicales-Malvales View MSA
124351091 5266 SBM View MSA
124247132 5268 Malvidae View MSA
124060560 5270 Rosid View MSA
123750770 5271 Pentapetalae View MSA
122792948 5272 Eudicot View MSA
122045867 5273 Angiosperm View MSA
121351003 5274 Embryophyte View MSA
123426098 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain