Gene : Brara.C02788 B. rapa FPsc v1.3
Defline:  (1 of 4) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs Genomic Order:  2788
Name:  ? Brara.C02788 Secondary Identifier:  ? PAC:30619148
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C02788 0.5kb upstream 0.5kb upstream 1701 true A03: 14286563-14288263 Brassica rapa FPsc
Brara.C02788 0.5kb upstream 0.5kb upstream 500 false A03: 14287764-14288263 Brassica rapa FPsc
Brara.C02788 0.5kb downstream 0.5kb downstream 1701 true A03: 14286063-14287763 Brassica rapa FPsc
Brara.C02788 0.5kb downstream 0.5kb downstream 500 false A03: 14286063-14286562 Brassica rapa FPsc
Brara.C02788 1.0kb upstream 1.0kb upstream 2201 true A03: 14286563-14288763 Brassica rapa FPsc
Brara.C02788 1.0kb upstream 1.0kb upstream 1000 false A03: 14287764-14288763 Brassica rapa FPsc
Brara.C02788 1.0kb downstream 1.0kb downstream 2201 true A03: 14285563-14287763 Brassica rapa FPsc
Brara.C02788 1.0kb downstream 1.0kb downstream 1000 false A03: 14285563-14286562 Brassica rapa FPsc
Brara.C02788 2.0kb upstream 2.0kb upstream 3201 true A03: 14286563-14289763 Brassica rapa FPsc
Brara.C02788 2.0kb upstream 2.0kb upstream 2000 false A03: 14287764-14289763 Brassica rapa FPsc
Brara.C02788 2.0kb downstream 2.0kb downstream 3201 true A03: 14284563-14287763 Brassica rapa FPsc
Brara.C02788 2.0kb downstream 2.0kb downstream 2000 false A03: 14284563-14286562 Brassica rapa FPsc
Brara.C02788 5.0kb upstream 5.0kb upstream 6201 true A03: 14286563-14292763 Brassica rapa FPsc
Brara.C02788 5.0kb upstream 5.0kb upstream 5000 false A03: 14287764-14292763 Brassica rapa FPsc
Brara.C02788 5.0kb downstream 5.0kb downstream 6201 true A03: 14281563-14287763 Brassica rapa FPsc
Brara.C02788 5.0kb downstream 5.0kb downstream 5000 false A03: 14281563-14286562 Brassica rapa FPsc
Brara.C02788 10.0kb upstream 10.0kb upstream 11201 true A03: 14286563-14297763 Brassica rapa FPsc
Brara.C02788 10.0kb upstream 10.0kb upstream 10000 false A03: 14287764-14297763 Brassica rapa FPsc
Brara.C02788 10.0kb downstream 10.0kb downstream 11201 true A03: 14276563-14287763 Brassica rapa FPsc
Brara.C02788 10.0kb downstream 10.0kb downstream 10000 false A03: 14276563-14286562 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362948 5261 Brassicaceae View MSA
123839137 5264 Brassicales-Malvales View MSA
124351091 5266 SBM View MSA
124247132 5268 Malvidae View MSA
124060560 5270 Rosid View MSA
123750770 5271 Pentapetalae View MSA
122792948 5272 Eudicot View MSA
122045867 5273 Angiosperm View MSA
121351003 5274 Embryophyte View MSA
123426098 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier