Gene : Gorai.008G005000 G. raimondii v2.1
Defline:  (1 of 6) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs Genomic Order:  50
Name:  ? Gorai.008G005000 Secondary Identifier:  ? PAC:26818774
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G005000 0.5kb upstream 0.5kb upstream 2844 true Chr08: 693081-695924 Gossypium raimondii
Gorai.008G005000 0.5kb upstream 0.5kb upstream 500 false Chr08: 695425-695924 Gossypium raimondii
Gorai.008G005000 0.5kb downstream 0.5kb downstream 2844 true Chr08: 692581-695424 Gossypium raimondii
Gorai.008G005000 0.5kb downstream 0.5kb downstream 500 false Chr08: 692581-693080 Gossypium raimondii
Gorai.008G005000 1.0kb upstream 1.0kb upstream 3344 true Chr08: 693081-696424 Gossypium raimondii
Gorai.008G005000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 695425-696424 Gossypium raimondii
Gorai.008G005000 1.0kb downstream 1.0kb downstream 3344 true Chr08: 692081-695424 Gossypium raimondii
Gorai.008G005000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 692081-693080 Gossypium raimondii
Gorai.008G005000 2.0kb upstream 2.0kb upstream 4344 true Chr08: 693081-697424 Gossypium raimondii
Gorai.008G005000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 695425-697424 Gossypium raimondii
Gorai.008G005000 2.0kb downstream 2.0kb downstream 4344 true Chr08: 691081-695424 Gossypium raimondii
Gorai.008G005000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 691081-693080 Gossypium raimondii
Gorai.008G005000 5.0kb upstream 5.0kb upstream 7344 true Chr08: 693081-700424 Gossypium raimondii
Gorai.008G005000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 695425-700424 Gossypium raimondii
Gorai.008G005000 5.0kb downstream 5.0kb downstream 7344 true Chr08: 688081-695424 Gossypium raimondii
Gorai.008G005000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 688081-693080 Gossypium raimondii
Gorai.008G005000 10.0kb upstream 10.0kb upstream 12344 true Chr08: 693081-705424 Gossypium raimondii
Gorai.008G005000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 695425-705424 Gossypium raimondii
Gorai.008G005000 10.0kb downstream 10.0kb downstream 12344 true Chr08: 683081-695424 Gossypium raimondii
Gorai.008G005000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 683081-693080 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123810214 5264 Brassicales-Malvales Singleton cluster - no MSA
124351091 5266 SBM View MSA
124247132 5268 Malvidae View MSA
124060560 5270 Rosid View MSA
123750770 5271 Pentapetalae View MSA
122792948 5272 Eudicot View MSA
122045867 5273 Angiosperm View MSA
121351003 5274 Embryophyte View MSA
123426098 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain