Gene : Brara.C03219 B. rapa FPsc v1.3
Defline:  (1 of 4) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs Genomic Order:  3219
Name:  ? Brara.C03219 Secondary Identifier:  ? PAC:30619229
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C03219 0.5kb upstream 0.5kb upstream 1365 true A03: 16318007-16319371 Brassica rapa FPsc
Brara.C03219 0.5kb upstream 0.5kb upstream 500 false A03: 16318007-16318506 Brassica rapa FPsc
Brara.C03219 0.5kb downstream 0.5kb downstream 1365 true A03: 16318507-16319871 Brassica rapa FPsc
Brara.C03219 0.5kb downstream 0.5kb downstream 500 false A03: 16319372-16319871 Brassica rapa FPsc
Brara.C03219 1.0kb upstream 1.0kb upstream 1865 true A03: 16317507-16319371 Brassica rapa FPsc
Brara.C03219 1.0kb upstream 1.0kb upstream 1000 false A03: 16317507-16318506 Brassica rapa FPsc
Brara.C03219 1.0kb downstream 1.0kb downstream 1865 true A03: 16318507-16320371 Brassica rapa FPsc
Brara.C03219 1.0kb downstream 1.0kb downstream 1000 false A03: 16319372-16320371 Brassica rapa FPsc
Brara.C03219 2.0kb upstream 2.0kb upstream 2865 true A03: 16316507-16319371 Brassica rapa FPsc
Brara.C03219 2.0kb upstream 2.0kb upstream 2000 false A03: 16316507-16318506 Brassica rapa FPsc
Brara.C03219 2.0kb downstream 2.0kb downstream 2865 true A03: 16318507-16321371 Brassica rapa FPsc
Brara.C03219 2.0kb downstream 2.0kb downstream 2000 false A03: 16319372-16321371 Brassica rapa FPsc
Brara.C03219 5.0kb upstream 5.0kb upstream 5865 true A03: 16313507-16319371 Brassica rapa FPsc
Brara.C03219 5.0kb upstream 5.0kb upstream 5000 false A03: 16313507-16318506 Brassica rapa FPsc
Brara.C03219 5.0kb downstream 5.0kb downstream 5865 true A03: 16318507-16324371 Brassica rapa FPsc
Brara.C03219 5.0kb downstream 5.0kb downstream 5000 false A03: 16319372-16324371 Brassica rapa FPsc
Brara.C03219 10.0kb upstream 10.0kb upstream 10865 true A03: 16308507-16319371 Brassica rapa FPsc
Brara.C03219 10.0kb upstream 10.0kb upstream 10000 false A03: 16308507-16318506 Brassica rapa FPsc
Brara.C03219 10.0kb downstream 10.0kb downstream 10865 true A03: 16318507-16329371 Brassica rapa FPsc
Brara.C03219 10.0kb downstream 10.0kb downstream 10000 false A03: 16319372-16329371 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362253 5261 Brassicaceae View MSA
123839137 5264 Brassicales-Malvales View MSA
124351091 5266 SBM View MSA
124247132 5268 Malvidae View MSA
124060560 5270 Rosid View MSA
123750770 5271 Pentapetalae View MSA
122792948 5272 Eudicot View MSA
122045867 5273 Angiosperm View MSA
121351003 5274 Embryophyte View MSA
123426098 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier