Gene : Glyma.03G152100 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR23338 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM Genomic Order:  1521
Name:  ? Glyma.03G152100 Secondary Identifier:  ? PAC:30515347
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G152100 0.5kb upstream 0.5kb upstream 3616 true Chr03: 36713661-36717276 Glycine max
Glyma.03G152100 0.5kb upstream 0.5kb upstream 500 false Chr03: 36713661-36714160 Glycine max
Glyma.03G152100 0.5kb downstream 0.5kb downstream 3616 true Chr03: 36714161-36717776 Glycine max
Glyma.03G152100 0.5kb downstream 0.5kb downstream 500 false Chr03: 36717277-36717776 Glycine max
Glyma.03G152100 1.0kb upstream 1.0kb upstream 4116 true Chr03: 36713161-36717276 Glycine max
Glyma.03G152100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 36713161-36714160 Glycine max
Glyma.03G152100 1.0kb downstream 1.0kb downstream 4116 true Chr03: 36714161-36718276 Glycine max
Glyma.03G152100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 36717277-36718276 Glycine max
Glyma.03G152100 2.0kb upstream 2.0kb upstream 5116 true Chr03: 36712161-36717276 Glycine max
Glyma.03G152100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 36712161-36714160 Glycine max
Glyma.03G152100 2.0kb downstream 2.0kb downstream 5116 true Chr03: 36714161-36719276 Glycine max
Glyma.03G152100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 36717277-36719276 Glycine max
Glyma.03G152100 5.0kb upstream 5.0kb upstream 8116 true Chr03: 36709161-36717276 Glycine max
Glyma.03G152100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 36709161-36714160 Glycine max
Glyma.03G152100 5.0kb downstream 5.0kb downstream 8116 true Chr03: 36714161-36722276 Glycine max
Glyma.03G152100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 36717277-36722276 Glycine max
Glyma.03G152100 10.0kb upstream 10.0kb upstream 13116 true Chr03: 36704161-36717276 Glycine max
Glyma.03G152100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 36704161-36714160 Glycine max
Glyma.03G152100 10.0kb downstream 10.0kb downstream 13116 true Chr03: 36714161-36727276 Glycine max
Glyma.03G152100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 36717277-36727276 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314520 5265 Fabidae View MSA
124060560 5270 Rosid View MSA
123750770 5271 Pentapetalae View MSA
122792948 5272 Eudicot View MSA
122045867 5273 Angiosperm View MSA
121351003 5274 Embryophyte View MSA
123426098 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.4898 0.0 48.688    
cufflinks 30.0814 0.0 80.8615 High  
cufflinks 10.4471 0.0 30.9201   Low
cufflinks 18.9585 0.0 52.415    
cufflinks 28.7423 0.0 77.3588 High  
cufflinks 24.5747 0.0 66.6583 High  
cufflinks 54.2988 0.0 145.157 High High
cufflinks 19.4578 0.0 53.6144    
cufflinks 28.8412 0.0 77.629 High  
cufflinks 4.751        
cufflinks 1.587       Low
cufflinks 4.892        
cufflinks 7.35     High  
cufflinks 10.845     High High
cufflinks 2.599       Low
cufflinks 8.791     High  
cufflinks 3.005        
cufflinks 6.128        
cufflinks 6.862        
cufflinks 7.755     High  
cufflinks 2.714       Low
cufflinks 8.149     High  
cufflinks 9.142     High High
cufflinks 2.093       Low
cufflinks 7.991     High  
cufflinks 3.561        

0 Strain