Gene : Glyma.02G242900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22849:SF43 - U-BOX DOMAIN-CONTAINING PROTEIN 54-RELATED Genomic Order:  2429
Name:  ? Glyma.02G242900 Secondary Identifier:  ? PAC:30509333
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G242900 0.5kb upstream 0.5kb upstream 1817 true Chr02: 43121957-43123773 Glycine max
Glyma.02G242900 0.5kb upstream 0.5kb upstream 500 false Chr02: 43121957-43122456 Glycine max
Glyma.02G242900 0.5kb downstream 0.5kb downstream 1817 true Chr02: 43122457-43124273 Glycine max
Glyma.02G242900 0.5kb downstream 0.5kb downstream 500 false Chr02: 43123774-43124273 Glycine max
Glyma.02G242900 1.0kb upstream 1.0kb upstream 2317 true Chr02: 43121457-43123773 Glycine max
Glyma.02G242900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 43121457-43122456 Glycine max
Glyma.02G242900 1.0kb downstream 1.0kb downstream 2317 true Chr02: 43122457-43124773 Glycine max
Glyma.02G242900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 43123774-43124773 Glycine max
Glyma.02G242900 2.0kb upstream 2.0kb upstream 3317 true Chr02: 43120457-43123773 Glycine max
Glyma.02G242900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 43120457-43122456 Glycine max
Glyma.02G242900 2.0kb downstream 2.0kb downstream 3317 true Chr02: 43122457-43125773 Glycine max
Glyma.02G242900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 43123774-43125773 Glycine max
Glyma.02G242900 5.0kb upstream 5.0kb upstream 6317 true Chr02: 43117457-43123773 Glycine max
Glyma.02G242900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 43117457-43122456 Glycine max
Glyma.02G242900 5.0kb downstream 5.0kb downstream 6317 true Chr02: 43122457-43128773 Glycine max
Glyma.02G242900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 43123774-43128773 Glycine max
Glyma.02G242900 10.0kb upstream 10.0kb upstream 11317 true Chr02: 43112457-43123773 Glycine max
Glyma.02G242900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 43112457-43122456 Glycine max
Glyma.02G242900 10.0kb downstream 10.0kb downstream 11317 true Chr02: 43122457-43133773 Glycine max
Glyma.02G242900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 43123774-43133773 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311953 5265 Fabidae View MSA
124062447 5270 Rosid View MSA
123744256 5271 Pentapetalae View MSA
122789600 5272 Eudicot View MSA
122042359 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.4821 0.0 67.9993 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.526673 0.0 1.97052    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.752201 0.0 2.75667    
cufflinks 1.59845 0.0 5.56276    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0648574 0.0 0.264323 Low Low
cufflinks 0.740887 0.0 2.72024    
cufflinks 3.868        
cufflinks 108.648     High High
cufflinks 6.803        
cufflinks 10.441     High  
cufflinks 0.778       Low
cufflinks 33.505     High  
cufflinks 6.076        
cufflinks 95.252     High High
cufflinks 1.167        
cufflinks 0.399       Low
cufflinks 2.563        
cufflinks 76.079     High High
cufflinks 3.388        
cufflinks 1.448        
cufflinks 95.57     High High
cufflinks 0.898       Low
cufflinks 75.301     High High

0 Strain