Gene : Glyma.04G000200 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR10625//PTHR10625:SF127 - HISTONE DEACETYLASE Genomic Order:  2
Name:  ? Glyma.04G000200 Secondary Identifier:  ? PAC:30488653
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G000200 0.5kb upstream 0.5kb upstream 9636 true Chr04: 21479-31114 Glycine max
Glyma.04G000200 0.5kb upstream 0.5kb upstream 500 false Chr04: 21479-21978 Glycine max
Glyma.04G000200 0.5kb downstream 0.5kb downstream 9636 true Chr04: 21979-31614 Glycine max
Glyma.04G000200 0.5kb downstream 0.5kb downstream 500 false Chr04: 31115-31614 Glycine max
Glyma.04G000200 1.0kb upstream 1.0kb upstream 10136 true Chr04: 20979-31114 Glycine max
Glyma.04G000200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 20979-21978 Glycine max
Glyma.04G000200 1.0kb downstream 1.0kb downstream 10136 true Chr04: 21979-32114 Glycine max
Glyma.04G000200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 31115-32114 Glycine max
Glyma.04G000200 2.0kb upstream 2.0kb upstream 11136 true Chr04: 19979-31114 Glycine max
Glyma.04G000200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 19979-21978 Glycine max
Glyma.04G000200 2.0kb downstream 2.0kb downstream 11136 true Chr04: 21979-33114 Glycine max
Glyma.04G000200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 31115-33114 Glycine max
Glyma.04G000200 5.0kb upstream 5.0kb upstream 14136 true Chr04: 16979-31114 Glycine max
Glyma.04G000200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 16979-21978 Glycine max
Glyma.04G000200 5.0kb downstream 5.0kb downstream 14136 true Chr04: 21979-36114 Glycine max
Glyma.04G000200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 31115-36114 Glycine max
Glyma.04G000200 10.0kb upstream 10.0kb upstream 19136 true Chr04: 11979-31114 Glycine max
Glyma.04G000200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 11979-21978 Glycine max
Glyma.04G000200 10.0kb downstream 10.0kb downstream 19136 true Chr04: 21979-41114 Glycine max
Glyma.04G000200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 31115-41114 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304084 5265 Fabidae View MSA
124064781 5270 Rosid View MSA
123742951 5271 Pentapetalae View MSA
122788730 5272 Eudicot View MSA
122042529 5273 Angiosperm View MSA
123429001 5275 Viridiplantae View MSA
121349926 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.6045 0.0 158.439 High  
cufflinks 34.8064 0.0 128.012 High  
cufflinks 50.4736 0.0 204.62 High High
cufflinks 30.4372 0.0 109.523 High Low
cufflinks 38.2628 0.0 143.23 High  
cufflinks 48.4626 0.0 191.908 High High
cufflinks 27.6732 0.0 97.8472 High Low
cufflinks 44.806 0.0 174.743 High  
cufflinks 36.914 0.0 137.632 High  
cufflinks 5.104        
cufflinks 5.334        
cufflinks 4.716        
cufflinks 6.696       High
cufflinks 6.527       High
cufflinks 4.401        
cufflinks 4.32       Low
cufflinks 4.965        
cufflinks 4.484        
cufflinks 5.547        
cufflinks 4.374        
cufflinks 4.679        
cufflinks 4.64        
cufflinks 4.802        
cufflinks 6.667     High High
cufflinks 4.223       Low
cufflinks 5.171        

0 Strain