Gene : Glyma.04G243200 G. max Wm82.a2.v1
Defline:  (1 of 57) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  2432
Name:  ? Glyma.04G243200 Secondary Identifier:  ? PAC:30488969
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Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G243200 0.5kb upstream 0.5kb upstream 2393 true Chr04: 51125996-51128388 Glycine max
Glyma.04G243200 0.5kb upstream 0.5kb upstream 500 false Chr04: 51127889-51128388 Glycine max
Glyma.04G243200 0.5kb downstream 0.5kb downstream 2393 true Chr04: 51125496-51127888 Glycine max
Glyma.04G243200 0.5kb downstream 0.5kb downstream 500 false Chr04: 51125496-51125995 Glycine max
Glyma.04G243200 1.0kb upstream 1.0kb upstream 2893 true Chr04: 51125996-51128888 Glycine max
Glyma.04G243200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 51127889-51128888 Glycine max
Glyma.04G243200 1.0kb downstream 1.0kb downstream 2893 true Chr04: 51124996-51127888 Glycine max
Glyma.04G243200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 51124996-51125995 Glycine max
Glyma.04G243200 2.0kb upstream 2.0kb upstream 3893 true Chr04: 51125996-51129888 Glycine max
Glyma.04G243200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 51127889-51129888 Glycine max
Glyma.04G243200 2.0kb downstream 2.0kb downstream 3893 true Chr04: 51123996-51127888 Glycine max
Glyma.04G243200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 51123996-51125995 Glycine max
Glyma.04G243200 5.0kb upstream 5.0kb upstream 6893 true Chr04: 51125996-51132888 Glycine max
Glyma.04G243200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 51127889-51132888 Glycine max
Glyma.04G243200 5.0kb downstream 5.0kb downstream 6893 true Chr04: 51120996-51127888 Glycine max
Glyma.04G243200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 51120996-51125995 Glycine max
Glyma.04G243200 10.0kb upstream 10.0kb upstream 11893 true Chr04: 51125996-51137888 Glycine max
Glyma.04G243200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 51127889-51137888 Glycine max
Glyma.04G243200 10.0kb downstream 10.0kb downstream 11893 true Chr04: 51115996-51127888 Glycine max
Glyma.04G243200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 51115996-51125995 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310036 5265 Fabidae View MSA
124070457 5270 Rosid View MSA
123736471 5271 Pentapetalae View MSA
122786011 5272 Eudicot View MSA
122048876 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.02815 0.0 3.66204    
cufflinks 1.04283 0.0 3.70444    
cufflinks 0.750966 0.0 2.71873    
cufflinks 1.81346 0.0 6.11599   High
cufflinks 0.382089 0.0 1.43971   Low
cufflinks 0.253708 0.0 0.971899 Low Low
cufflinks 0.955798 0.0 3.42407    
cufflinks 1.34416 0.0 4.67991    
cufflinks 0.734191 0.0 2.67077    
cufflinks 0.758        
cufflinks 0.727        
cufflinks 1.435       High
cufflinks 0.81        
cufflinks 0.876        
cufflinks 0.643        
cufflinks 0.999        
cufflinks 1.154        
cufflinks 1.306       High
cufflinks 1.462       High
cufflinks 0.791        
cufflinks 0.494       Low
cufflinks 0.982        
cufflinks 0.898        
cufflinks 0.553       Low
cufflinks 0.812        
cufflinks 0.505       Low

0 Strain