Gene : Sevir.9G449800 S. viridis v2.1
Defline:  (1 of 1) K00995 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (pgsA, PGS1) Genomic Order:  4922
Name:  ? Sevir.9G449800 Secondary Identifier:  ? PAC:40614059
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY4FS-7 Setaria viridis pathologic  
Sviridis PWY-5269 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.9G449800 0.5kb upstream 0.5kb upstream 4668 true Chr_09: 47141202-47145869 Setaria viridis
Sevir.9G449800 0.5kb upstream 0.5kb upstream 500 false Chr_09: 47141202-47141701 Setaria viridis
Sevir.9G449800 0.5kb downstream 0.5kb downstream 4668 true Chr_09: 47141702-47146369 Setaria viridis
Sevir.9G449800 0.5kb downstream 0.5kb downstream 500 false Chr_09: 47145870-47146369 Setaria viridis
Sevir.9G449800 1.0kb upstream 1.0kb upstream 5168 true Chr_09: 47140702-47145869 Setaria viridis
Sevir.9G449800 1.0kb upstream 1.0kb upstream 1000 false Chr_09: 47140702-47141701 Setaria viridis
Sevir.9G449800 1.0kb downstream 1.0kb downstream 5168 true Chr_09: 47141702-47146869 Setaria viridis
Sevir.9G449800 1.0kb downstream 1.0kb downstream 1000 false Chr_09: 47145870-47146869 Setaria viridis
Sevir.9G449800 2.0kb upstream 2.0kb upstream 6168 true Chr_09: 47139702-47145869 Setaria viridis
Sevir.9G449800 2.0kb upstream 2.0kb upstream 2000 false Chr_09: 47139702-47141701 Setaria viridis
Sevir.9G449800 2.0kb downstream 2.0kb downstream 6168 true Chr_09: 47141702-47147869 Setaria viridis
Sevir.9G449800 2.0kb downstream 2.0kb downstream 2000 false Chr_09: 47145870-47147869 Setaria viridis
Sevir.9G449800 5.0kb upstream 5.0kb upstream 9168 true Chr_09: 47136702-47145869 Setaria viridis
Sevir.9G449800 5.0kb upstream 5.0kb upstream 5000 false Chr_09: 47136702-47141701 Setaria viridis
Sevir.9G449800 5.0kb downstream 5.0kb downstream 9168 true Chr_09: 47141702-47150869 Setaria viridis
Sevir.9G449800 5.0kb downstream 5.0kb downstream 5000 false Chr_09: 47145870-47150869 Setaria viridis
Sevir.9G449800 10.0kb upstream 10.0kb upstream 14168 true Chr_09: 47131702-47145869 Setaria viridis
Sevir.9G449800 10.0kb upstream 10.0kb upstream 10000 false Chr_09: 47131702-47141701 Setaria viridis
Sevir.9G449800 10.0kb downstream 10.0kb downstream 14168 true Chr_09: 47141702-47155869 Setaria viridis
Sevir.9G449800 10.0kb downstream 10.0kb downstream 10000 false Chr_09: 47145870-47155869 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041214 5273 Angiosperm View MSA
122184074 5267 Panicoideae View MSA
124580312 5269 Grass View MSA
121349383 5274 Embryophyte View MSA
123424626 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain