Gene : Sevir.6G020500 S. viridis v2.1
Defline:  (1 of 1) KOG2803 - Choline phosphate cytidylyltransferase/Predicted CDP-ethanolamine synthase Genomic Order:  229
Name:  ? Sevir.6G020500 Secondary Identifier:  ? PAC:40618345
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY4FS-6 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.6G020500 0.5kb upstream 0.5kb upstream 5062 true Chr_06: 1473601-1478662 Setaria viridis
Sevir.6G020500 0.5kb upstream 0.5kb upstream 500 false Chr_06: 1478163-1478662 Setaria viridis
Sevir.6G020500 0.5kb downstream 0.5kb downstream 5062 true Chr_06: 1473101-1478162 Setaria viridis
Sevir.6G020500 0.5kb downstream 0.5kb downstream 500 false Chr_06: 1473101-1473600 Setaria viridis
Sevir.6G020500 1.0kb upstream 1.0kb upstream 5562 true Chr_06: 1473601-1479162 Setaria viridis
Sevir.6G020500 1.0kb upstream 1.0kb upstream 1000 false Chr_06: 1478163-1479162 Setaria viridis
Sevir.6G020500 1.0kb downstream 1.0kb downstream 5562 true Chr_06: 1472601-1478162 Setaria viridis
Sevir.6G020500 1.0kb downstream 1.0kb downstream 1000 false Chr_06: 1472601-1473600 Setaria viridis
Sevir.6G020500 2.0kb upstream 2.0kb upstream 6562 true Chr_06: 1473601-1480162 Setaria viridis
Sevir.6G020500 2.0kb upstream 2.0kb upstream 2000 false Chr_06: 1478163-1480162 Setaria viridis
Sevir.6G020500 2.0kb downstream 2.0kb downstream 6562 true Chr_06: 1471601-1478162 Setaria viridis
Sevir.6G020500 2.0kb downstream 2.0kb downstream 2000 false Chr_06: 1471601-1473600 Setaria viridis
Sevir.6G020500 5.0kb upstream 5.0kb upstream 9562 true Chr_06: 1473601-1483162 Setaria viridis
Sevir.6G020500 5.0kb upstream 5.0kb upstream 5000 false Chr_06: 1478163-1483162 Setaria viridis
Sevir.6G020500 5.0kb downstream 5.0kb downstream 9562 true Chr_06: 1468601-1478162 Setaria viridis
Sevir.6G020500 5.0kb downstream 5.0kb downstream 5000 false Chr_06: 1468601-1473600 Setaria viridis
Sevir.6G020500 10.0kb upstream 10.0kb upstream 14562 true Chr_06: 1473601-1488162 Setaria viridis
Sevir.6G020500 10.0kb upstream 10.0kb upstream 10000 false Chr_06: 1478163-1488162 Setaria viridis
Sevir.6G020500 10.0kb downstream 10.0kb downstream 14562 true Chr_06: 1463601-1478162 Setaria viridis
Sevir.6G020500 10.0kb downstream 10.0kb downstream 10000 false Chr_06: 1463601-1473600 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176545 5267 Panicoideae View MSA
124568937 5269 Grass View MSA
122041937 5273 Angiosperm View MSA
121349404 5274 Embryophyte View MSA
123426391 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain