Gene : Brara.G00882 B. rapa FPsc v1.3
Defline:  (1 of 7) PTHR10161 - TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5 Genomic Order:  882
Name:  ? Brara.G00882 Secondary Identifier:  ? PAC:30634143
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5083 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6348 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G00882 0.5kb upstream 0.5kb upstream 2520 true A07: 10590762-10593281 Brassica rapa FPsc
Brara.G00882 0.5kb upstream 0.5kb upstream 500 false A07: 10592782-10593281 Brassica rapa FPsc
Brara.G00882 0.5kb downstream 0.5kb downstream 2520 true A07: 10590262-10592781 Brassica rapa FPsc
Brara.G00882 0.5kb downstream 0.5kb downstream 500 false A07: 10590262-10590761 Brassica rapa FPsc
Brara.G00882 1.0kb upstream 1.0kb upstream 3020 true A07: 10590762-10593781 Brassica rapa FPsc
Brara.G00882 1.0kb upstream 1.0kb upstream 1000 false A07: 10592782-10593781 Brassica rapa FPsc
Brara.G00882 1.0kb downstream 1.0kb downstream 3020 true A07: 10589762-10592781 Brassica rapa FPsc
Brara.G00882 1.0kb downstream 1.0kb downstream 1000 false A07: 10589762-10590761 Brassica rapa FPsc
Brara.G00882 2.0kb upstream 2.0kb upstream 4020 true A07: 10590762-10594781 Brassica rapa FPsc
Brara.G00882 2.0kb upstream 2.0kb upstream 2000 false A07: 10592782-10594781 Brassica rapa FPsc
Brara.G00882 2.0kb downstream 2.0kb downstream 4020 true A07: 10588762-10592781 Brassica rapa FPsc
Brara.G00882 2.0kb downstream 2.0kb downstream 2000 false A07: 10588762-10590761 Brassica rapa FPsc
Brara.G00882 5.0kb upstream 5.0kb upstream 7020 true A07: 10590762-10597781 Brassica rapa FPsc
Brara.G00882 5.0kb upstream 5.0kb upstream 5000 false A07: 10592782-10597781 Brassica rapa FPsc
Brara.G00882 5.0kb downstream 5.0kb downstream 7020 true A07: 10585762-10592781 Brassica rapa FPsc
Brara.G00882 5.0kb downstream 5.0kb downstream 5000 false A07: 10585762-10590761 Brassica rapa FPsc
Brara.G00882 10.0kb upstream 10.0kb upstream 12020 true A07: 10590762-10602781 Brassica rapa FPsc
Brara.G00882 10.0kb upstream 10.0kb upstream 10000 false A07: 10592782-10602781 Brassica rapa FPsc
Brara.G00882 10.0kb downstream 10.0kb downstream 12020 true A07: 10580762-10592781 Brassica rapa FPsc
Brara.G00882 10.0kb downstream 10.0kb downstream 10000 false A07: 10580762-10590761 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364034 5261 Brassicaceae View MSA
123841578 5264 Brassicales-Malvales View MSA
124349660 5266 SBM View MSA
124248897 5268 Malvidae View MSA
124061132 5270 Rosid View MSA
123743122 5271 Pentapetalae View MSA
122795933 5272 Eudicot View MSA
122045102 5273 Angiosperm View MSA
121351076 5274 Embryophyte View MSA
123427142 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier