Gene : Brara.A03188 B. rapa FPsc v1.3
Defline:  (1 of 4) PF00076//PF07145//PF14259 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Ataxin-2 C-terminal region (PAM2) // RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) Genomic Order:  3188
Name:  ? Brara.A03188 Secondary Identifier:  ? PAC:30638912
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A03188 0.5kb upstream 0.5kb upstream 3034 true A01: 26664351-26667384 Brassica rapa FPsc
Brara.A03188 0.5kb upstream 0.5kb upstream 500 false A01: 26666885-26667384 Brassica rapa FPsc
Brara.A03188 0.5kb downstream 0.5kb downstream 3034 true A01: 26663851-26666884 Brassica rapa FPsc
Brara.A03188 0.5kb downstream 0.5kb downstream 500 false A01: 26663851-26664350 Brassica rapa FPsc
Brara.A03188 1.0kb upstream 1.0kb upstream 3534 true A01: 26664351-26667884 Brassica rapa FPsc
Brara.A03188 1.0kb upstream 1.0kb upstream 1000 false A01: 26666885-26667884 Brassica rapa FPsc
Brara.A03188 1.0kb downstream 1.0kb downstream 3534 true A01: 26663351-26666884 Brassica rapa FPsc
Brara.A03188 1.0kb downstream 1.0kb downstream 1000 false A01: 26663351-26664350 Brassica rapa FPsc
Brara.A03188 2.0kb upstream 2.0kb upstream 4534 true A01: 26664351-26668884 Brassica rapa FPsc
Brara.A03188 2.0kb upstream 2.0kb upstream 2000 false A01: 26666885-26668884 Brassica rapa FPsc
Brara.A03188 2.0kb downstream 2.0kb downstream 4534 true A01: 26662351-26666884 Brassica rapa FPsc
Brara.A03188 2.0kb downstream 2.0kb downstream 2000 false A01: 26662351-26664350 Brassica rapa FPsc
Brara.A03188 5.0kb upstream 5.0kb upstream 7534 true A01: 26664351-26671884 Brassica rapa FPsc
Brara.A03188 5.0kb upstream 5.0kb upstream 5000 false A01: 26666885-26671884 Brassica rapa FPsc
Brara.A03188 5.0kb downstream 5.0kb downstream 7534 true A01: 26659351-26666884 Brassica rapa FPsc
Brara.A03188 5.0kb downstream 5.0kb downstream 5000 false A01: 26659351-26664350 Brassica rapa FPsc
Brara.A03188 10.0kb upstream 10.0kb upstream 12534 true A01: 26664351-26676884 Brassica rapa FPsc
Brara.A03188 10.0kb upstream 10.0kb upstream 10000 false A01: 26666885-26676884 Brassica rapa FPsc
Brara.A03188 10.0kb downstream 10.0kb downstream 12534 true A01: 26654351-26666884 Brassica rapa FPsc
Brara.A03188 10.0kb downstream 10.0kb downstream 10000 false A01: 26654351-26664350 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122352778 5261 Brassicaceae Singleton cluster - no MSA
123791456 5264 Brassicales-Malvales Singleton cluster - no MSA
124289370 5266 SBM Singleton cluster - no MSA
124251598 5268 Malvidae View MSA
124064964 5270 Rosid View MSA
123740266 5271 Pentapetalae View MSA
122794524 5272 Eudicot View MSA
122049515 5273 Angiosperm View MSA
121344395 5274 Embryophyte View MSA
123428747 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

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