Gene : Brara.E00100 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR12802:SF43 - PROTEIN CCA1-RELATED Genomic Order:  100
Name:  ? Brara.E00100 Secondary Identifier:  ? PAC:30626468
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E00100 0.5kb upstream 0.5kb upstream 3577 true A05: 588556-592132 Brassica rapa FPsc
Brara.E00100 0.5kb upstream 0.5kb upstream 500 false A05: 591633-592132 Brassica rapa FPsc
Brara.E00100 0.5kb downstream 0.5kb downstream 3577 true A05: 588056-591632 Brassica rapa FPsc
Brara.E00100 0.5kb downstream 0.5kb downstream 500 false A05: 588056-588555 Brassica rapa FPsc
Brara.E00100 1.0kb upstream 1.0kb upstream 4077 true A05: 588556-592632 Brassica rapa FPsc
Brara.E00100 1.0kb upstream 1.0kb upstream 1000 false A05: 591633-592632 Brassica rapa FPsc
Brara.E00100 1.0kb downstream 1.0kb downstream 4077 true A05: 587556-591632 Brassica rapa FPsc
Brara.E00100 1.0kb downstream 1.0kb downstream 1000 false A05: 587556-588555 Brassica rapa FPsc
Brara.E00100 2.0kb upstream 2.0kb upstream 5077 true A05: 588556-593632 Brassica rapa FPsc
Brara.E00100 2.0kb upstream 2.0kb upstream 2000 false A05: 591633-593632 Brassica rapa FPsc
Brara.E00100 2.0kb downstream 2.0kb downstream 5077 true A05: 586556-591632 Brassica rapa FPsc
Brara.E00100 2.0kb downstream 2.0kb downstream 2000 false A05: 586556-588555 Brassica rapa FPsc
Brara.E00100 5.0kb upstream 5.0kb upstream 8077 true A05: 588556-596632 Brassica rapa FPsc
Brara.E00100 5.0kb upstream 5.0kb upstream 5000 false A05: 591633-596632 Brassica rapa FPsc
Brara.E00100 5.0kb downstream 5.0kb downstream 8077 true A05: 583556-591632 Brassica rapa FPsc
Brara.E00100 5.0kb downstream 5.0kb downstream 5000 false A05: 583556-588555 Brassica rapa FPsc
Brara.E00100 10.0kb upstream 10.0kb upstream 13077 true A05: 588556-601632 Brassica rapa FPsc
Brara.E00100 10.0kb upstream 10.0kb upstream 10000 false A05: 591633-601632 Brassica rapa FPsc
Brara.E00100 10.0kb downstream 10.0kb downstream 13077 true A05: 578556-591632 Brassica rapa FPsc
Brara.E00100 10.0kb downstream 10.0kb downstream 10000 false A05: 578556-588555 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369628 5261 Brassicaceae View MSA
123799812 5264 Brassicales-Malvales View MSA
124346704 5266 SBM View MSA
124237237 5268 Malvidae View MSA
124066959 5270 Rosid View MSA
123746755 5271 Pentapetalae View MSA
122793236 5272 Eudicot View MSA
122048982 5273 Angiosperm View MSA
121350117 5274 Embryophyte View MSA
123427162 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier