Gene : Brara.E00118 B. rapa FPsc v1.3
Defline:  (1 of 7) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) Genomic Order:  118
Name:  ? Brara.E00118 Secondary Identifier:  ? PAC:30627114
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E00118 0.5kb upstream 0.5kb upstream 2867 true A05: 724467-727333 Brassica rapa FPsc
Brara.E00118 0.5kb upstream 0.5kb upstream 500 false A05: 724467-724966 Brassica rapa FPsc
Brara.E00118 0.5kb downstream 0.5kb downstream 2867 true A05: 724967-727833 Brassica rapa FPsc
Brara.E00118 0.5kb downstream 0.5kb downstream 500 false A05: 727334-727833 Brassica rapa FPsc
Brara.E00118 1.0kb upstream 1.0kb upstream 3367 true A05: 723967-727333 Brassica rapa FPsc
Brara.E00118 1.0kb upstream 1.0kb upstream 1000 false A05: 723967-724966 Brassica rapa FPsc
Brara.E00118 1.0kb downstream 1.0kb downstream 3367 true A05: 724967-728333 Brassica rapa FPsc
Brara.E00118 1.0kb downstream 1.0kb downstream 1000 false A05: 727334-728333 Brassica rapa FPsc
Brara.E00118 2.0kb upstream 2.0kb upstream 4367 true A05: 722967-727333 Brassica rapa FPsc
Brara.E00118 2.0kb upstream 2.0kb upstream 2000 false A05: 722967-724966 Brassica rapa FPsc
Brara.E00118 2.0kb downstream 2.0kb downstream 4367 true A05: 724967-729333 Brassica rapa FPsc
Brara.E00118 2.0kb downstream 2.0kb downstream 2000 false A05: 727334-729333 Brassica rapa FPsc
Brara.E00118 5.0kb upstream 5.0kb upstream 7367 true A05: 719967-727333 Brassica rapa FPsc
Brara.E00118 5.0kb upstream 5.0kb upstream 5000 false A05: 719967-724966 Brassica rapa FPsc
Brara.E00118 5.0kb downstream 5.0kb downstream 7367 true A05: 724967-732333 Brassica rapa FPsc
Brara.E00118 5.0kb downstream 5.0kb downstream 5000 false A05: 727334-732333 Brassica rapa FPsc
Brara.E00118 10.0kb upstream 10.0kb upstream 12367 true A05: 714967-727333 Brassica rapa FPsc
Brara.E00118 10.0kb upstream 10.0kb upstream 10000 false A05: 714967-724966 Brassica rapa FPsc
Brara.E00118 10.0kb downstream 10.0kb downstream 12367 true A05: 724967-737333 Brassica rapa FPsc
Brara.E00118 10.0kb downstream 10.0kb downstream 10000 false A05: 727334-737333 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122349957 5261 Brassicaceae Singleton cluster - no MSA
123789066 5264 Brassicales-Malvales Singleton cluster - no MSA
124287072 5266 SBM Singleton cluster - no MSA
124251066 5268 Malvidae View MSA
124069321 5270 Rosid View MSA
123751972 5271 Pentapetalae View MSA
122797642 5272 Eudicot View MSA
122042700 5273 Angiosperm View MSA
121346873 5274 Embryophyte View MSA
123428073 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier