Gene : Brara.I00727 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR10625:SF109 - HISTONE DEACETYLASE 2 Genomic Order:  727
Name:  ? Brara.I00727 Secondary Identifier:  ? PAC:30641876
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I00727 0.5kb upstream 0.5kb upstream 3141 true A09: 4109663-4112803 Brassica rapa FPsc
Brara.I00727 0.5kb upstream 0.5kb upstream 500 false A09: 4112304-4112803 Brassica rapa FPsc
Brara.I00727 0.5kb downstream 0.5kb downstream 3141 true A09: 4109163-4112303 Brassica rapa FPsc
Brara.I00727 0.5kb downstream 0.5kb downstream 500 false A09: 4109163-4109662 Brassica rapa FPsc
Brara.I00727 1.0kb upstream 1.0kb upstream 3641 true A09: 4109663-4113303 Brassica rapa FPsc
Brara.I00727 1.0kb upstream 1.0kb upstream 1000 false A09: 4112304-4113303 Brassica rapa FPsc
Brara.I00727 1.0kb downstream 1.0kb downstream 3641 true A09: 4108663-4112303 Brassica rapa FPsc
Brara.I00727 1.0kb downstream 1.0kb downstream 1000 false A09: 4108663-4109662 Brassica rapa FPsc
Brara.I00727 2.0kb upstream 2.0kb upstream 4641 true A09: 4109663-4114303 Brassica rapa FPsc
Brara.I00727 2.0kb upstream 2.0kb upstream 2000 false A09: 4112304-4114303 Brassica rapa FPsc
Brara.I00727 2.0kb downstream 2.0kb downstream 4641 true A09: 4107663-4112303 Brassica rapa FPsc
Brara.I00727 2.0kb downstream 2.0kb downstream 2000 false A09: 4107663-4109662 Brassica rapa FPsc
Brara.I00727 5.0kb upstream 5.0kb upstream 7641 true A09: 4109663-4117303 Brassica rapa FPsc
Brara.I00727 5.0kb upstream 5.0kb upstream 5000 false A09: 4112304-4117303 Brassica rapa FPsc
Brara.I00727 5.0kb downstream 5.0kb downstream 7641 true A09: 4104663-4112303 Brassica rapa FPsc
Brara.I00727 5.0kb downstream 5.0kb downstream 5000 false A09: 4104663-4109662 Brassica rapa FPsc
Brara.I00727 10.0kb upstream 10.0kb upstream 12641 true A09: 4109663-4122303 Brassica rapa FPsc
Brara.I00727 10.0kb upstream 10.0kb upstream 10000 false A09: 4112304-4122303 Brassica rapa FPsc
Brara.I00727 10.0kb downstream 10.0kb downstream 12641 true A09: 4099663-4112303 Brassica rapa FPsc
Brara.I00727 10.0kb downstream 10.0kb downstream 10000 false A09: 4099663-4109662 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362858 5261 Brassicaceae View MSA
123834309 5264 Brassicales-Malvales View MSA
124338395 5266 SBM View MSA
124239133 5268 Malvidae View MSA
124068435 5270 Rosid View MSA
123739181 5271 Pentapetalae View MSA
122793784 5272 Eudicot View MSA
122043471 5273 Angiosperm View MSA
123429001 5275 Viridiplantae View MSA
121349926 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier