Gene : Brara.K00008 B. rapa FPsc v1.3
Defline:  (1 of 13) PF02689//PF05970//PF14214 - Helicase (Herpes_Helicase) // PIF1-like helicase (PIF1) // Helitron helicase-like domain at N-terminus (Helitron_like_N) Genomic Order:  4
Name:  ? Brara.K00008 Secondary Identifier:  ? PAC:30640511
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K00008 0.5kb upstream 0.5kb upstream 5187 true Scaffold1034: 50264-55450 Brassica rapa FPsc
Brara.K00008 0.5kb upstream 0.5kb upstream 500 false Scaffold1034: 50264-50763 Brassica rapa FPsc
Brara.K00008 0.5kb downstream 0.5kb downstream 5187 true Scaffold1034: 50764-55950 Brassica rapa FPsc
Brara.K00008 0.5kb downstream 0.5kb downstream 500 false Scaffold1034: 55451-55950 Brassica rapa FPsc
Brara.K00008 1.0kb upstream 1.0kb upstream 5687 true Scaffold1034: 49764-55450 Brassica rapa FPsc
Brara.K00008 1.0kb upstream 1.0kb upstream 1000 false Scaffold1034: 49764-50763 Brassica rapa FPsc
Brara.K00008 1.0kb downstream 1.0kb downstream 5687 true Scaffold1034: 50764-56450 Brassica rapa FPsc
Brara.K00008 1.0kb downstream 1.0kb downstream 1000 false Scaffold1034: 55451-56450 Brassica rapa FPsc
Brara.K00008 2.0kb upstream 2.0kb upstream 6687 true Scaffold1034: 48764-55450 Brassica rapa FPsc
Brara.K00008 2.0kb upstream 2.0kb upstream 2000 false Scaffold1034: 48764-50763 Brassica rapa FPsc
Brara.K00008 2.0kb downstream 2.0kb downstream 6687 true Scaffold1034: 50764-57450 Brassica rapa FPsc
Brara.K00008 2.0kb downstream 2.0kb downstream 2000 false Scaffold1034: 55451-57450 Brassica rapa FPsc
Brara.K00008 5.0kb upstream 5.0kb upstream 9687 true Scaffold1034: 45764-55450 Brassica rapa FPsc
Brara.K00008 5.0kb upstream 5.0kb upstream 5000 false Scaffold1034: 45764-50763 Brassica rapa FPsc
Brara.K00008 5.0kb downstream 5.0kb downstream 9687 true Scaffold1034: 50764-60450 Brassica rapa FPsc
Brara.K00008 5.0kb downstream 5.0kb downstream 5000 false Scaffold1034: 55451-60450 Brassica rapa FPsc
Brara.K00008 10.0kb upstream 10.0kb upstream 14687 true Scaffold1034: 40764-55450 Brassica rapa FPsc
Brara.K00008 10.0kb upstream 10.0kb upstream 10000 false Scaffold1034: 40764-50763 Brassica rapa FPsc
Brara.K00008 10.0kb downstream 10.0kb downstream 14687 true Scaffold1034: 50764-65450 Brassica rapa FPsc
Brara.K00008 10.0kb downstream 10.0kb downstream 10000 false Scaffold1034: 55451-65450 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029830 5273 Angiosperm View MSA
122380204 5261 Brassicaceae View MSA
123802598 5264 Brassicales-Malvales View MSA
124350527 5266 SBM View MSA
124252774 5268 Malvidae View MSA
124051325 5270 Rosid View MSA
123752824 5271 Pentapetalae View MSA
122797633 5272 Eudicot View MSA
121351580 5274 Embryophyte View MSA
123426292 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier