Gene : Brara.E03130 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR11685//PTHR11685:SF149 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING Genomic Order:  3130
Name:  ? Brara.E03130 Secondary Identifier:  ? PAC:30626715
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E03130 0.5kb upstream 0.5kb upstream 1591 true A05: 25723317-25724907 Brassica rapa FPsc
Brara.E03130 0.5kb upstream 0.5kb upstream 500 false A05: 25724408-25724907 Brassica rapa FPsc
Brara.E03130 0.5kb downstream 0.5kb downstream 1591 true A05: 25722817-25724407 Brassica rapa FPsc
Brara.E03130 0.5kb downstream 0.5kb downstream 500 false A05: 25722817-25723316 Brassica rapa FPsc
Brara.E03130 1.0kb upstream 1.0kb upstream 2091 true A05: 25723317-25725407 Brassica rapa FPsc
Brara.E03130 1.0kb upstream 1.0kb upstream 1000 false A05: 25724408-25725407 Brassica rapa FPsc
Brara.E03130 1.0kb downstream 1.0kb downstream 2091 true A05: 25722317-25724407 Brassica rapa FPsc
Brara.E03130 1.0kb downstream 1.0kb downstream 1000 false A05: 25722317-25723316 Brassica rapa FPsc
Brara.E03130 2.0kb upstream 2.0kb upstream 3091 true A05: 25723317-25726407 Brassica rapa FPsc
Brara.E03130 2.0kb upstream 2.0kb upstream 2000 false A05: 25724408-25726407 Brassica rapa FPsc
Brara.E03130 2.0kb downstream 2.0kb downstream 3091 true A05: 25721317-25724407 Brassica rapa FPsc
Brara.E03130 2.0kb downstream 2.0kb downstream 2000 false A05: 25721317-25723316 Brassica rapa FPsc
Brara.E03130 5.0kb upstream 5.0kb upstream 6091 true A05: 25723317-25729407 Brassica rapa FPsc
Brara.E03130 5.0kb upstream 5.0kb upstream 5000 false A05: 25724408-25729407 Brassica rapa FPsc
Brara.E03130 5.0kb downstream 5.0kb downstream 6091 true A05: 25718317-25724407 Brassica rapa FPsc
Brara.E03130 5.0kb downstream 5.0kb downstream 5000 false A05: 25718317-25723316 Brassica rapa FPsc
Brara.E03130 10.0kb upstream 10.0kb upstream 11091 true A05: 25723317-25734407 Brassica rapa FPsc
Brara.E03130 10.0kb upstream 10.0kb upstream 10000 false A05: 25724408-25734407 Brassica rapa FPsc
Brara.E03130 10.0kb downstream 10.0kb downstream 11091 true A05: 25713317-25724407 Brassica rapa FPsc
Brara.E03130 10.0kb downstream 10.0kb downstream 10000 false A05: 25713317-25723316 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122355990 5261 Brassicaceae View MSA
123794147 5264 Brassicales-Malvales View MSA
124352030 5266 SBM View MSA
124252111 5268 Malvidae View MSA
124068077 5270 Rosid View MSA
123752192 5271 Pentapetalae View MSA
122796967 5272 Eudicot View MSA
122046828 5273 Angiosperm View MSA
123429065 5275 Viridiplantae View MSA
121348618 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier