Gene : Brara.F00609 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR12565:SF178 - TRANSCRIPTION FACTOR PIF3 Genomic Order:  609
Name:  ? Brara.F00609 Secondary Identifier:  ? PAC:30631303
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F00609 0.5kb upstream 0.5kb upstream 3742 true A06: 3541947-3545688 Brassica rapa FPsc
Brara.F00609 0.5kb upstream 0.5kb upstream 500 false A06: 3541947-3542446 Brassica rapa FPsc
Brara.F00609 0.5kb downstream 0.5kb downstream 3742 true A06: 3542447-3546188 Brassica rapa FPsc
Brara.F00609 0.5kb downstream 0.5kb downstream 500 false A06: 3545689-3546188 Brassica rapa FPsc
Brara.F00609 1.0kb upstream 1.0kb upstream 4242 true A06: 3541447-3545688 Brassica rapa FPsc
Brara.F00609 1.0kb upstream 1.0kb upstream 1000 false A06: 3541447-3542446 Brassica rapa FPsc
Brara.F00609 1.0kb downstream 1.0kb downstream 4242 true A06: 3542447-3546688 Brassica rapa FPsc
Brara.F00609 1.0kb downstream 1.0kb downstream 1000 false A06: 3545689-3546688 Brassica rapa FPsc
Brara.F00609 2.0kb upstream 2.0kb upstream 5242 true A06: 3540447-3545688 Brassica rapa FPsc
Brara.F00609 2.0kb upstream 2.0kb upstream 2000 false A06: 3540447-3542446 Brassica rapa FPsc
Brara.F00609 2.0kb downstream 2.0kb downstream 5242 true A06: 3542447-3547688 Brassica rapa FPsc
Brara.F00609 2.0kb downstream 2.0kb downstream 2000 false A06: 3545689-3547688 Brassica rapa FPsc
Brara.F00609 5.0kb upstream 5.0kb upstream 8242 true A06: 3537447-3545688 Brassica rapa FPsc
Brara.F00609 5.0kb upstream 5.0kb upstream 5000 false A06: 3537447-3542446 Brassica rapa FPsc
Brara.F00609 5.0kb downstream 5.0kb downstream 8242 true A06: 3542447-3550688 Brassica rapa FPsc
Brara.F00609 5.0kb downstream 5.0kb downstream 5000 false A06: 3545689-3550688 Brassica rapa FPsc
Brara.F00609 10.0kb upstream 10.0kb upstream 13242 true A06: 3532447-3545688 Brassica rapa FPsc
Brara.F00609 10.0kb upstream 10.0kb upstream 10000 false A06: 3532447-3542446 Brassica rapa FPsc
Brara.F00609 10.0kb downstream 10.0kb downstream 13242 true A06: 3542447-3555688 Brassica rapa FPsc
Brara.F00609 10.0kb downstream 10.0kb downstream 10000 false A06: 3545689-3555688 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363365 5261 Brassicaceae View MSA
123798525 5264 Brassicales-Malvales View MSA
124296151 5266 SBM View MSA
124252658 5268 Malvidae View MSA
124069526 5270 Rosid View MSA
123737897 5271 Pentapetalae View MSA
122794460 5272 Eudicot View MSA
122048181 5273 Angiosperm View MSA
121348763 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier