Gene : Brara.I00984 B. rapa FPsc v1.3

Defline:  (1 of 13) PF07816 - Protein of unknown function (DUF1645) (DUF1645) Genomic Order:  984
Name:  ? Brara.I00984 Secondary Identifier:  ? PAC:30641211

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I00984 0.5kb upstream 0.5kb upstream 1614 true A09: 5536669-5538282 Brassica rapa FPsc
Brara.I00984 0.5kb upstream 0.5kb upstream 500 false A09: 5537783-5538282 Brassica rapa FPsc
Brara.I00984 0.5kb downstream 0.5kb downstream 1614 true A09: 5536169-5537782 Brassica rapa FPsc
Brara.I00984 0.5kb downstream 0.5kb downstream 500 false A09: 5536169-5536668 Brassica rapa FPsc
Brara.I00984 1.0kb upstream 1.0kb upstream 2114 true A09: 5536669-5538782 Brassica rapa FPsc
Brara.I00984 1.0kb upstream 1.0kb upstream 1000 false A09: 5537783-5538782 Brassica rapa FPsc
Brara.I00984 1.0kb downstream 1.0kb downstream 2114 true A09: 5535669-5537782 Brassica rapa FPsc
Brara.I00984 1.0kb downstream 1.0kb downstream 1000 false A09: 5535669-5536668 Brassica rapa FPsc
Brara.I00984 2.0kb upstream 2.0kb upstream 3114 true A09: 5536669-5539782 Brassica rapa FPsc
Brara.I00984 2.0kb upstream 2.0kb upstream 2000 false A09: 5537783-5539782 Brassica rapa FPsc
Brara.I00984 2.0kb downstream 2.0kb downstream 3114 true A09: 5534669-5537782 Brassica rapa FPsc
Brara.I00984 2.0kb downstream 2.0kb downstream 2000 false A09: 5534669-5536668 Brassica rapa FPsc
Brara.I00984 5.0kb upstream 5.0kb upstream 6114 true A09: 5536669-5542782 Brassica rapa FPsc
Brara.I00984 5.0kb upstream 5.0kb upstream 5000 false A09: 5537783-5542782 Brassica rapa FPsc
Brara.I00984 5.0kb downstream 5.0kb downstream 6114 true A09: 5531669-5537782 Brassica rapa FPsc
Brara.I00984 5.0kb downstream 5.0kb downstream 5000 false A09: 5531669-5536668 Brassica rapa FPsc
Brara.I00984 10.0kb upstream 10.0kb upstream 11114 true A09: 5536669-5547782 Brassica rapa FPsc
Brara.I00984 10.0kb upstream 10.0kb upstream 10000 false A09: 5537783-5547782 Brassica rapa FPsc
Brara.I00984 10.0kb downstream 10.0kb downstream 11114 true A09: 5526669-5537782 Brassica rapa FPsc
Brara.I00984 10.0kb downstream 10.0kb downstream 10000 false A09: 5526669-5536668 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375502 5261 Brassicaceae View MSA
123835192 5264 Brassicales-Malvales View MSA
124337537 5266 SBM View MSA
124249741 5268 Malvidae View MSA
124067177 5270 Rosid View MSA
123751144 5271 Pentapetalae View MSA
122791968 5272 Eudicot View MSA
122047451 5273 Angiosperm View MSA
121350053 5274 Embryophyte View MSA
123381556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier