Gene : Bostr.29246s0038 B. stricta v1.2
Defline:  (1 of 1) PTHR11236:SF14 - ANTHRANILATE SYNTHASE ALPHA SUBUNIT 1, CHLOROPLASTIC-RELATED Genomic Order:  38
Name:  ? Bostr.29246s0038 Secondary Identifier:  ? PAC:30655719
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta TRPSYN-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.29246s0038 0.5kb upstream 0.5kb upstream 3867 true Scaffold29246: 260275-264141 Boechera stricta
Bostr.29246s0038 0.5kb upstream 0.5kb upstream 500 false Scaffold29246: 263642-264141 Boechera stricta
Bostr.29246s0038 0.5kb downstream 0.5kb downstream 3867 true Scaffold29246: 259775-263641 Boechera stricta
Bostr.29246s0038 0.5kb downstream 0.5kb downstream 500 false Scaffold29246: 259775-260274 Boechera stricta
Bostr.29246s0038 1.0kb upstream 1.0kb upstream 4367 true Scaffold29246: 260275-264641 Boechera stricta
Bostr.29246s0038 1.0kb upstream 1.0kb upstream 1000 false Scaffold29246: 263642-264641 Boechera stricta
Bostr.29246s0038 1.0kb downstream 1.0kb downstream 4367 true Scaffold29246: 259275-263641 Boechera stricta
Bostr.29246s0038 1.0kb downstream 1.0kb downstream 1000 false Scaffold29246: 259275-260274 Boechera stricta
Bostr.29246s0038 2.0kb upstream 2.0kb upstream 5367 true Scaffold29246: 260275-265641 Boechera stricta
Bostr.29246s0038 2.0kb upstream 2.0kb upstream 2000 false Scaffold29246: 263642-265641 Boechera stricta
Bostr.29246s0038 2.0kb downstream 2.0kb downstream 5367 true Scaffold29246: 258275-263641 Boechera stricta
Bostr.29246s0038 2.0kb downstream 2.0kb downstream 2000 false Scaffold29246: 258275-260274 Boechera stricta
Bostr.29246s0038 5.0kb upstream 5.0kb upstream 8367 true Scaffold29246: 260275-268641 Boechera stricta
Bostr.29246s0038 5.0kb upstream 5.0kb upstream 5000 false Scaffold29246: 263642-268641 Boechera stricta
Bostr.29246s0038 5.0kb downstream 5.0kb downstream 8367 true Scaffold29246: 255275-263641 Boechera stricta
Bostr.29246s0038 5.0kb downstream 5.0kb downstream 5000 false Scaffold29246: 255275-260274 Boechera stricta
Bostr.29246s0038 10.0kb upstream 10.0kb upstream 13367 true Scaffold29246: 260275-273641 Boechera stricta
Bostr.29246s0038 10.0kb upstream 10.0kb upstream 10000 false Scaffold29246: 263642-273641 Boechera stricta
Bostr.29246s0038 10.0kb downstream 10.0kb downstream 13367 true Scaffold29246: 250275-263641 Boechera stricta
Bostr.29246s0038 10.0kb downstream 10.0kb downstream 10000 false Scaffold29246: 250275-260274 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373154 5261 Brassicaceae View MSA
123838470 5264 Brassicales-Malvales View MSA
124346682 5266 SBM View MSA
124240153 5268 Malvidae View MSA
124064882 5270 Rosid View MSA
123744113 5271 Pentapetalae View MSA
122793457 5272 Eudicot View MSA
122041793 5273 Angiosperm View MSA
121344938 5274 Embryophyte View MSA
123424277 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain