Gene : Bostr.1460s0142 B. stricta v1.2
Defline:  (1 of 1) PTHR21725 - PUSHOVER/RETINOBLASTOMA-ASSOCIATED FACTOR 600 Genomic Order:  142
Name:  ? Bostr.1460s0142 Secondary Identifier:  ? PAC:30654720
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7511 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.1460s0142 0.5kb upstream 0.5kb upstream 18575 true Scaffold1460: 584486-603060 Boechera stricta
Bostr.1460s0142 0.5kb upstream 0.5kb upstream 500 false Scaffold1460: 602561-603060 Boechera stricta
Bostr.1460s0142 0.5kb downstream 0.5kb downstream 18575 true Scaffold1460: 583986-602560 Boechera stricta
Bostr.1460s0142 0.5kb downstream 0.5kb downstream 500 false Scaffold1460: 583986-584485 Boechera stricta
Bostr.1460s0142 1.0kb upstream 1.0kb upstream 19075 true Scaffold1460: 584486-603560 Boechera stricta
Bostr.1460s0142 1.0kb upstream 1.0kb upstream 1000 false Scaffold1460: 602561-603560 Boechera stricta
Bostr.1460s0142 1.0kb downstream 1.0kb downstream 19075 true Scaffold1460: 583486-602560 Boechera stricta
Bostr.1460s0142 1.0kb downstream 1.0kb downstream 1000 false Scaffold1460: 583486-584485 Boechera stricta
Bostr.1460s0142 2.0kb upstream 2.0kb upstream 20075 true Scaffold1460: 584486-604560 Boechera stricta
Bostr.1460s0142 2.0kb upstream 2.0kb upstream 2000 false Scaffold1460: 602561-604560 Boechera stricta
Bostr.1460s0142 2.0kb downstream 2.0kb downstream 20075 true Scaffold1460: 582486-602560 Boechera stricta
Bostr.1460s0142 2.0kb downstream 2.0kb downstream 2000 false Scaffold1460: 582486-584485 Boechera stricta
Bostr.1460s0142 5.0kb upstream 5.0kb upstream 23075 true Scaffold1460: 584486-607560 Boechera stricta
Bostr.1460s0142 5.0kb upstream 5.0kb upstream 5000 false Scaffold1460: 602561-607560 Boechera stricta
Bostr.1460s0142 5.0kb downstream 5.0kb downstream 23075 true Scaffold1460: 579486-602560 Boechera stricta
Bostr.1460s0142 5.0kb downstream 5.0kb downstream 5000 false Scaffold1460: 579486-584485 Boechera stricta
Bostr.1460s0142 10.0kb upstream 10.0kb upstream 28075 true Scaffold1460: 584486-612560 Boechera stricta
Bostr.1460s0142 10.0kb upstream 10.0kb upstream 10000 false Scaffold1460: 602561-612560 Boechera stricta
Bostr.1460s0142 10.0kb downstream 10.0kb downstream 28075 true Scaffold1460: 574486-602560 Boechera stricta
Bostr.1460s0142 10.0kb downstream 10.0kb downstream 10000 false Scaffold1460: 574486-584485 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363550 5261 Brassicaceae View MSA
123828628 5264 Brassicales-Malvales View MSA
124337601 5266 SBM View MSA
124243657 5268 Malvidae View MSA
124068853 5270 Rosid View MSA
123737535 5271 Pentapetalae View MSA
122791099 5272 Eudicot View MSA
122042481 5273 Angiosperm View MSA
121347237 5274 Embryophyte View MSA
123425333 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain