Gene : Bostr.18473s0338 B. stricta v1.2
Defline:  (1 of 9) KOG0114 - Predicted RNA-binding protein (RRM superfamily) Genomic Order:  338
Name:  ? Bostr.18473s0338 Secondary Identifier:  ? PAC:30666860
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.18473s0338 0.5kb upstream 0.5kb upstream 2253 true Scaffold18473: 1843509-1845761 Boechera stricta
Bostr.18473s0338 0.5kb upstream 0.5kb upstream 500 false Scaffold18473: 1843509-1844008 Boechera stricta
Bostr.18473s0338 0.5kb downstream 0.5kb downstream 2253 true Scaffold18473: 1844009-1846261 Boechera stricta
Bostr.18473s0338 0.5kb downstream 0.5kb downstream 500 false Scaffold18473: 1845762-1846261 Boechera stricta
Bostr.18473s0338 1.0kb upstream 1.0kb upstream 2753 true Scaffold18473: 1843009-1845761 Boechera stricta
Bostr.18473s0338 1.0kb upstream 1.0kb upstream 1000 false Scaffold18473: 1843009-1844008 Boechera stricta
Bostr.18473s0338 1.0kb downstream 1.0kb downstream 2753 true Scaffold18473: 1844009-1846761 Boechera stricta
Bostr.18473s0338 1.0kb downstream 1.0kb downstream 1000 false Scaffold18473: 1845762-1846761 Boechera stricta
Bostr.18473s0338 2.0kb upstream 2.0kb upstream 3753 true Scaffold18473: 1842009-1845761 Boechera stricta
Bostr.18473s0338 2.0kb upstream 2.0kb upstream 2000 false Scaffold18473: 1842009-1844008 Boechera stricta
Bostr.18473s0338 2.0kb downstream 2.0kb downstream 3753 true Scaffold18473: 1844009-1847761 Boechera stricta
Bostr.18473s0338 2.0kb downstream 2.0kb downstream 2000 false Scaffold18473: 1845762-1847761 Boechera stricta
Bostr.18473s0338 5.0kb upstream 5.0kb upstream 6753 true Scaffold18473: 1839009-1845761 Boechera stricta
Bostr.18473s0338 5.0kb upstream 5.0kb upstream 5000 false Scaffold18473: 1839009-1844008 Boechera stricta
Bostr.18473s0338 5.0kb downstream 5.0kb downstream 6753 true Scaffold18473: 1844009-1850761 Boechera stricta
Bostr.18473s0338 5.0kb downstream 5.0kb downstream 5000 false Scaffold18473: 1845762-1850761 Boechera stricta
Bostr.18473s0338 10.0kb upstream 10.0kb upstream 11753 true Scaffold18473: 1834009-1845761 Boechera stricta
Bostr.18473s0338 10.0kb upstream 10.0kb upstream 10000 false Scaffold18473: 1834009-1844008 Boechera stricta
Bostr.18473s0338 10.0kb downstream 10.0kb downstream 11753 true Scaffold18473: 1844009-1855761 Boechera stricta
Bostr.18473s0338 10.0kb downstream 10.0kb downstream 10000 false Scaffold18473: 1845762-1855761 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368268 5261 Brassicaceae View MSA
123835519 5264 Brassicales-Malvales View MSA
124349980 5266 SBM View MSA
124252985 5268 Malvidae View MSA
124061661 5270 Rosid View MSA
123747843 5271 Pentapetalae View MSA
122790614 5272 Eudicot View MSA
122044868 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349952 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain