Gene : Bostr.25993s0104 B. stricta v1.2
Defline:  (1 of 5) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) Genomic Order:  104
Name:  ? Bostr.25993s0104 Secondary Identifier:  ? PAC:30667438
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25993s0104 0.5kb upstream 0.5kb upstream 2454 true Scaffold25993: 554582-557035 Boechera stricta
Bostr.25993s0104 0.5kb upstream 0.5kb upstream 500 false Scaffold25993: 554582-555081 Boechera stricta
Bostr.25993s0104 0.5kb downstream 0.5kb downstream 2454 true Scaffold25993: 555082-557535 Boechera stricta
Bostr.25993s0104 0.5kb downstream 0.5kb downstream 500 false Scaffold25993: 557036-557535 Boechera stricta
Bostr.25993s0104 1.0kb upstream 1.0kb upstream 2954 true Scaffold25993: 554082-557035 Boechera stricta
Bostr.25993s0104 1.0kb upstream 1.0kb upstream 1000 false Scaffold25993: 554082-555081 Boechera stricta
Bostr.25993s0104 1.0kb downstream 1.0kb downstream 2954 true Scaffold25993: 555082-558035 Boechera stricta
Bostr.25993s0104 1.0kb downstream 1.0kb downstream 1000 false Scaffold25993: 557036-558035 Boechera stricta
Bostr.25993s0104 2.0kb upstream 2.0kb upstream 3954 true Scaffold25993: 553082-557035 Boechera stricta
Bostr.25993s0104 2.0kb upstream 2.0kb upstream 2000 false Scaffold25993: 553082-555081 Boechera stricta
Bostr.25993s0104 2.0kb downstream 2.0kb downstream 3954 true Scaffold25993: 555082-559035 Boechera stricta
Bostr.25993s0104 2.0kb downstream 2.0kb downstream 2000 false Scaffold25993: 557036-559035 Boechera stricta
Bostr.25993s0104 5.0kb upstream 5.0kb upstream 6954 true Scaffold25993: 550082-557035 Boechera stricta
Bostr.25993s0104 5.0kb upstream 5.0kb upstream 5000 false Scaffold25993: 550082-555081 Boechera stricta
Bostr.25993s0104 5.0kb downstream 5.0kb downstream 6954 true Scaffold25993: 555082-562035 Boechera stricta
Bostr.25993s0104 5.0kb downstream 5.0kb downstream 5000 false Scaffold25993: 557036-562035 Boechera stricta
Bostr.25993s0104 10.0kb upstream 10.0kb upstream 11954 true Scaffold25993: 545082-557035 Boechera stricta
Bostr.25993s0104 10.0kb upstream 10.0kb upstream 10000 false Scaffold25993: 545082-555081 Boechera stricta
Bostr.25993s0104 10.0kb downstream 10.0kb downstream 11954 true Scaffold25993: 555082-567035 Boechera stricta
Bostr.25993s0104 10.0kb downstream 10.0kb downstream 10000 false Scaffold25993: 557036-567035 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343704 5261 Brassicaceae View MSA
123783819 5264 Brassicales-Malvales View MSA
124282032 5266 SBM View MSA
124251066 5268 Malvidae View MSA
124069321 5270 Rosid View MSA
123751972 5271 Pentapetalae View MSA
122797642 5272 Eudicot View MSA
122042700 5273 Angiosperm View MSA
121346873 5274 Embryophyte View MSA
123428073 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain