Gene : Cucsa.322880 C. sativus v1.0
Defline:  (1 of 1) PTHR19376:SF37 - DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1 Genomic Order:  276
Name:  ? Cucsa.322880 Secondary Identifier:  ? PAC:16977843
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.322880 0.5kb upstream 0.5kb upstream 9868 true scaffold03080: 2478020-2487887 Cucumis sativus
Cucsa.322880 0.5kb upstream 0.5kb upstream 500 false scaffold03080: 2478020-2478519 Cucumis sativus
Cucsa.322880 0.5kb downstream 0.5kb downstream 9868 true scaffold03080: 2478520-2488387 Cucumis sativus
Cucsa.322880 0.5kb downstream 0.5kb downstream 500 false scaffold03080: 2487888-2488387 Cucumis sativus
Cucsa.322880 1.0kb upstream 1.0kb upstream 10368 true scaffold03080: 2477520-2487887 Cucumis sativus
Cucsa.322880 1.0kb upstream 1.0kb upstream 1000 false scaffold03080: 2477520-2478519 Cucumis sativus
Cucsa.322880 1.0kb downstream 1.0kb downstream 10368 true scaffold03080: 2478520-2488887 Cucumis sativus
Cucsa.322880 1.0kb downstream 1.0kb downstream 1000 false scaffold03080: 2487888-2488887 Cucumis sativus
Cucsa.322880 2.0kb upstream 2.0kb upstream 11368 true scaffold03080: 2476520-2487887 Cucumis sativus
Cucsa.322880 2.0kb upstream 2.0kb upstream 2000 false scaffold03080: 2476520-2478519 Cucumis sativus
Cucsa.322880 2.0kb downstream 2.0kb downstream 11368 true scaffold03080: 2478520-2489887 Cucumis sativus
Cucsa.322880 2.0kb downstream 2.0kb downstream 2000 false scaffold03080: 2487888-2489887 Cucumis sativus
Cucsa.322880 5.0kb upstream 5.0kb upstream 14368 true scaffold03080: 2473520-2487887 Cucumis sativus
Cucsa.322880 5.0kb upstream 5.0kb upstream 5000 false scaffold03080: 2473520-2478519 Cucumis sativus
Cucsa.322880 5.0kb downstream 5.0kb downstream 14368 true scaffold03080: 2478520-2492887 Cucumis sativus
Cucsa.322880 5.0kb downstream 5.0kb downstream 5000 false scaffold03080: 2487888-2492887 Cucumis sativus
Cucsa.322880 10.0kb upstream 10.0kb upstream 19368 true scaffold03080: 2468520-2487887 Cucumis sativus
Cucsa.322880 10.0kb upstream 10.0kb upstream 10000 false scaffold03080: 2468520-2478519 Cucumis sativus
Cucsa.322880 10.0kb downstream 10.0kb downstream 19368 true scaffold03080: 2478520-2497887 Cucumis sativus
Cucsa.322880 10.0kb downstream 10.0kb downstream 10000 false scaffold03080: 2487888-2497887 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041040 5273 Angiosperm View MSA
122307609 5265 Fabidae View MSA
124064405 5270 Rosid View MSA
123740882 5271 Pentapetalae View MSA
122790504 5272 Eudicot View MSA
121343935 5274 Embryophyte View MSA
123424077 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain