Gene : Cucsa.078320 C. sativus v1.0
Defline:  (1 of 85) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON Genomic Order:  45
Name:  ? Cucsa.078320 Secondary Identifier:  ? PAC:16956068
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.078320 0.5kb upstream 0.5kb upstream 4254 true scaffold00793: 635975-640228 Cucumis sativus
Cucsa.078320 0.5kb upstream 0.5kb upstream 500 false scaffold00793: 639729-640228 Cucumis sativus
Cucsa.078320 0.5kb downstream 0.5kb downstream 4254 true scaffold00793: 635475-639728 Cucumis sativus
Cucsa.078320 0.5kb downstream 0.5kb downstream 500 false scaffold00793: 635475-635974 Cucumis sativus
Cucsa.078320 1.0kb upstream 1.0kb upstream 4754 true scaffold00793: 635975-640728 Cucumis sativus
Cucsa.078320 1.0kb upstream 1.0kb upstream 1000 false scaffold00793: 639729-640728 Cucumis sativus
Cucsa.078320 1.0kb downstream 1.0kb downstream 4754 true scaffold00793: 634975-639728 Cucumis sativus
Cucsa.078320 1.0kb downstream 1.0kb downstream 1000 false scaffold00793: 634975-635974 Cucumis sativus
Cucsa.078320 2.0kb upstream 2.0kb upstream 5754 true scaffold00793: 635975-641728 Cucumis sativus
Cucsa.078320 2.0kb upstream 2.0kb upstream 2000 false scaffold00793: 639729-641728 Cucumis sativus
Cucsa.078320 2.0kb downstream 2.0kb downstream 5754 true scaffold00793: 633975-639728 Cucumis sativus
Cucsa.078320 2.0kb downstream 2.0kb downstream 2000 false scaffold00793: 633975-635974 Cucumis sativus
Cucsa.078320 5.0kb upstream 5.0kb upstream 8754 true scaffold00793: 635975-644728 Cucumis sativus
Cucsa.078320 5.0kb upstream 5.0kb upstream 5000 false scaffold00793: 639729-644728 Cucumis sativus
Cucsa.078320 5.0kb downstream 5.0kb downstream 8754 true scaffold00793: 630975-639728 Cucumis sativus
Cucsa.078320 5.0kb downstream 5.0kb downstream 5000 false scaffold00793: 630975-635974 Cucumis sativus
Cucsa.078320 10.0kb upstream 10.0kb upstream 13754 true scaffold00793: 635975-649728 Cucumis sativus
Cucsa.078320 10.0kb upstream 10.0kb upstream 10000 false scaffold00793: 639729-649728 Cucumis sativus
Cucsa.078320 10.0kb downstream 10.0kb downstream 13754 true scaffold00793: 625975-639728 Cucumis sativus
Cucsa.078320 10.0kb downstream 10.0kb downstream 10000 false scaffold00793: 625975-635974 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029855 5273 Angiosperm View MSA
122237559 5265 Fabidae View MSA
124038205 5270 Rosid View MSA
123753008 5271 Pentapetalae View MSA
122774914 5272 Eudicot View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain