Gene : Cucsa.124610 C. sativus v1.0
Defline:  (1 of 1) PTHR30603:SF9 - RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTIC Genomic Order:  69
Name:  ? Cucsa.124610 Secondary Identifier:  ? PAC:16961743
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.124610 0.5kb upstream 0.5kb upstream 5469 true scaffold01001: 487833-493301 Cucumis sativus
Cucsa.124610 0.5kb upstream 0.5kb upstream 500 false scaffold01001: 487833-488332 Cucumis sativus
Cucsa.124610 0.5kb downstream 0.5kb downstream 5469 true scaffold01001: 488333-493801 Cucumis sativus
Cucsa.124610 0.5kb downstream 0.5kb downstream 500 false scaffold01001: 493302-493801 Cucumis sativus
Cucsa.124610 1.0kb upstream 1.0kb upstream 5969 true scaffold01001: 487333-493301 Cucumis sativus
Cucsa.124610 1.0kb upstream 1.0kb upstream 1000 false scaffold01001: 487333-488332 Cucumis sativus
Cucsa.124610 1.0kb downstream 1.0kb downstream 5969 true scaffold01001: 488333-494301 Cucumis sativus
Cucsa.124610 1.0kb downstream 1.0kb downstream 1000 false scaffold01001: 493302-494301 Cucumis sativus
Cucsa.124610 2.0kb upstream 2.0kb upstream 6969 true scaffold01001: 486333-493301 Cucumis sativus
Cucsa.124610 2.0kb upstream 2.0kb upstream 2000 false scaffold01001: 486333-488332 Cucumis sativus
Cucsa.124610 2.0kb downstream 2.0kb downstream 6969 true scaffold01001: 488333-495301 Cucumis sativus
Cucsa.124610 2.0kb downstream 2.0kb downstream 2000 false scaffold01001: 493302-495301 Cucumis sativus
Cucsa.124610 5.0kb upstream 5.0kb upstream 9969 true scaffold01001: 483333-493301 Cucumis sativus
Cucsa.124610 5.0kb upstream 5.0kb upstream 5000 false scaffold01001: 483333-488332 Cucumis sativus
Cucsa.124610 5.0kb downstream 5.0kb downstream 9969 true scaffold01001: 488333-498301 Cucumis sativus
Cucsa.124610 5.0kb downstream 5.0kb downstream 5000 false scaffold01001: 493302-498301 Cucumis sativus
Cucsa.124610 10.0kb upstream 10.0kb upstream 14969 true scaffold01001: 478333-493301 Cucumis sativus
Cucsa.124610 10.0kb upstream 10.0kb upstream 10000 false scaffold01001: 478333-488332 Cucumis sativus
Cucsa.124610 10.0kb downstream 10.0kb downstream 14969 true scaffold01001: 488333-503301 Cucumis sativus
Cucsa.124610 10.0kb downstream 10.0kb downstream 10000 false scaffold01001: 493302-503301 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311038 5265 Fabidae View MSA
124065306 5270 Rosid View MSA
123751307 5271 Pentapetalae View MSA
122790419 5272 Eudicot View MSA
122046988 5273 Angiosperm View MSA
121346903 5274 Embryophyte View MSA
123428711 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain