Gene : Cucsa.149270 C. sativus v1.0
Defline:  (1 of 3) PTHR11685//PTHR11685:SF149 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING Genomic Order:  14
Name:  ? Cucsa.149270 Secondary Identifier:  ? PAC:16964247
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-7511 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.149270 0.5kb upstream 0.5kb upstream 1613 true scaffold01110: 128460-130072 Cucumis sativus
Cucsa.149270 0.5kb upstream 0.5kb upstream 500 false scaffold01110: 128460-128959 Cucumis sativus
Cucsa.149270 0.5kb downstream 0.5kb downstream 1613 true scaffold01110: 128960-130572 Cucumis sativus
Cucsa.149270 0.5kb downstream 0.5kb downstream 500 false scaffold01110: 130073-130572 Cucumis sativus
Cucsa.149270 1.0kb upstream 1.0kb upstream 2113 true scaffold01110: 127960-130072 Cucumis sativus
Cucsa.149270 1.0kb upstream 1.0kb upstream 1000 false scaffold01110: 127960-128959 Cucumis sativus
Cucsa.149270 1.0kb downstream 1.0kb downstream 2113 true scaffold01110: 128960-131072 Cucumis sativus
Cucsa.149270 1.0kb downstream 1.0kb downstream 1000 false scaffold01110: 130073-131072 Cucumis sativus
Cucsa.149270 2.0kb upstream 2.0kb upstream 3113 true scaffold01110: 126960-130072 Cucumis sativus
Cucsa.149270 2.0kb upstream 2.0kb upstream 2000 false scaffold01110: 126960-128959 Cucumis sativus
Cucsa.149270 2.0kb downstream 2.0kb downstream 3113 true scaffold01110: 128960-132072 Cucumis sativus
Cucsa.149270 2.0kb downstream 2.0kb downstream 2000 false scaffold01110: 130073-132072 Cucumis sativus
Cucsa.149270 5.0kb upstream 5.0kb upstream 6113 true scaffold01110: 123960-130072 Cucumis sativus
Cucsa.149270 5.0kb upstream 5.0kb upstream 5000 false scaffold01110: 123960-128959 Cucumis sativus
Cucsa.149270 5.0kb downstream 5.0kb downstream 6113 true scaffold01110: 128960-135072 Cucumis sativus
Cucsa.149270 5.0kb downstream 5.0kb downstream 5000 false scaffold01110: 130073-135072 Cucumis sativus
Cucsa.149270 10.0kb upstream 10.0kb upstream 11113 true scaffold01110: 118960-130072 Cucumis sativus
Cucsa.149270 10.0kb upstream 10.0kb upstream 10000 false scaffold01110: 118960-128959 Cucumis sativus
Cucsa.149270 10.0kb downstream 10.0kb downstream 11113 true scaffold01110: 128960-140072 Cucumis sativus
Cucsa.149270 10.0kb downstream 10.0kb downstream 10000 false scaffold01110: 130073-140072 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310958 5265 Fabidae View MSA
124068077 5270 Rosid View MSA
123752192 5271 Pentapetalae View MSA
122796967 5272 Eudicot View MSA
122046828 5273 Angiosperm View MSA
123429065 5275 Viridiplantae View MSA
121348618 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain