Gene : Cucsa.333400 C. sativus v1.0
Defline:  (1 of 85) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON Genomic Order:  1
Name:  ? Cucsa.333400 Secondary Identifier:  ? PAC:16978357
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.333400 0.5kb upstream 0.5kb upstream 2028 true scaffold03280: 374-2401 Cucumis sativus
Cucsa.333400 0.5kb upstream 0.5kb upstream 500 false scaffold03280: 1902-2401 Cucumis sativus
Cucsa.333400 0.5kb downstream 0.5kb downstream 1901 true scaffold03280: 1-1901 Cucumis sativus
Cucsa.333400 0.5kb downstream 0.5kb downstream 373 false scaffold03280: 1-373 Cucumis sativus
Cucsa.333400 1.0kb upstream 1.0kb upstream 2528 true scaffold03280: 374-2901 Cucumis sativus
Cucsa.333400 1.0kb upstream 1.0kb upstream 1000 false scaffold03280: 1902-2901 Cucumis sativus
Cucsa.333400 1.0kb downstream 1.0kb downstream 1901 true scaffold03280: 1-1901 Cucumis sativus
Cucsa.333400 1.0kb downstream 1.0kb downstream 373 false scaffold03280: 1-373 Cucumis sativus
Cucsa.333400 2.0kb upstream 2.0kb upstream 3528 true scaffold03280: 374-3901 Cucumis sativus
Cucsa.333400 2.0kb upstream 2.0kb upstream 2000 false scaffold03280: 1902-3901 Cucumis sativus
Cucsa.333400 2.0kb downstream 2.0kb downstream 1901 true scaffold03280: 1-1901 Cucumis sativus
Cucsa.333400 2.0kb downstream 2.0kb downstream 373 false scaffold03280: 1-373 Cucumis sativus
Cucsa.333400 5.0kb upstream 5.0kb upstream 6528 true scaffold03280: 374-6901 Cucumis sativus
Cucsa.333400 5.0kb upstream 5.0kb upstream 5000 false scaffold03280: 1902-6901 Cucumis sativus
Cucsa.333400 5.0kb downstream 5.0kb downstream 1901 true scaffold03280: 1-1901 Cucumis sativus
Cucsa.333400 5.0kb downstream 5.0kb downstream 373 false scaffold03280: 1-373 Cucumis sativus
Cucsa.333400 10.0kb upstream 10.0kb upstream 11528 true scaffold03280: 374-11901 Cucumis sativus
Cucsa.333400 10.0kb upstream 10.0kb upstream 10000 false scaffold03280: 1902-11901 Cucumis sativus
Cucsa.333400 10.0kb downstream 10.0kb downstream 1901 true scaffold03280: 1-1901 Cucumis sativus
Cucsa.333400 10.0kb downstream 10.0kb downstream 373 false scaffold03280: 1-373 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122237479 5265 Fabidae View MSA
123983175 5270 Rosid View MSA
123753620 5271 Pentapetalae View MSA
122797847 5272 Eudicot View MSA
122051084 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain