Gene : Medtr1g026035 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) Description:  PPR containing plant-like protein
Genomic Order:  1122 Name:  ? Medtr1g026035
Secondary Identifier:  ? PAC:31094823
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g026035 0.5kb upstream 0.5kb upstream 3452 true chr1: 8384643-8388094 Medicago truncatula
Medtr1g026035 0.5kb upstream 0.5kb upstream 500 false chr1: 8384643-8385142 Medicago truncatula
Medtr1g026035 0.5kb downstream 0.5kb downstream 3452 true chr1: 8385143-8388594 Medicago truncatula
Medtr1g026035 0.5kb downstream 0.5kb downstream 500 false chr1: 8388095-8388594 Medicago truncatula
Medtr1g026035 1.0kb upstream 1.0kb upstream 3952 true chr1: 8384143-8388094 Medicago truncatula
Medtr1g026035 1.0kb upstream 1.0kb upstream 1000 false chr1: 8384143-8385142 Medicago truncatula
Medtr1g026035 1.0kb downstream 1.0kb downstream 3952 true chr1: 8385143-8389094 Medicago truncatula
Medtr1g026035 1.0kb downstream 1.0kb downstream 1000 false chr1: 8388095-8389094 Medicago truncatula
Medtr1g026035 2.0kb upstream 2.0kb upstream 4952 true chr1: 8383143-8388094 Medicago truncatula
Medtr1g026035 2.0kb upstream 2.0kb upstream 2000 false chr1: 8383143-8385142 Medicago truncatula
Medtr1g026035 2.0kb downstream 2.0kb downstream 4952 true chr1: 8385143-8390094 Medicago truncatula
Medtr1g026035 2.0kb downstream 2.0kb downstream 2000 false chr1: 8388095-8390094 Medicago truncatula
Medtr1g026035 5.0kb upstream 5.0kb upstream 7952 true chr1: 8380143-8388094 Medicago truncatula
Medtr1g026035 5.0kb upstream 5.0kb upstream 5000 false chr1: 8380143-8385142 Medicago truncatula
Medtr1g026035 5.0kb downstream 5.0kb downstream 7952 true chr1: 8385143-8393094 Medicago truncatula
Medtr1g026035 5.0kb downstream 5.0kb downstream 5000 false chr1: 8388095-8393094 Medicago truncatula
Medtr1g026035 10.0kb upstream 10.0kb upstream 12952 true chr1: 8375143-8388094 Medicago truncatula
Medtr1g026035 10.0kb upstream 10.0kb upstream 10000 false chr1: 8375143-8385142 Medicago truncatula
Medtr1g026035 10.0kb downstream 10.0kb downstream 12952 true chr1: 8385143-8398094 Medicago truncatula
Medtr1g026035 10.0kb downstream 10.0kb downstream 10000 false chr1: 8388095-8398094 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306317 5265 Fabidae View MSA
124062766 5270 Rosid View MSA
123737498 5271 Pentapetalae View MSA
122787562 5272 Eudicot View MSA
122047377 5273 Angiosperm View MSA
121348028 5274 Embryophyte View MSA
123380709 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.1        
cufflinks 0.975        
cufflinks 1.163        
cufflinks 0.08        
cufflinks 1.753       High
cufflinks 0.062     Low Low
cufflinks 0.113        
cufflinks 1.211       High
cufflinks 0.11        

0 Strain