Protein Family : endonucleases 122047377

Method ID:  5273 Method Name:  Angiosperm
Sequence Alignment:  View MSA Member Count:  69
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69 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29780.t000007 (1 of 1) PF01535//PF03161 - PPR repeat (PPR) // LAGLIDADG DNA endonuclease family (LAGLIDADG_2) R. communis v0.1 3084   29780: 68124-71207
Cucsa.140270 (1 of 1) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) C. sativus v1.0 3523   scaffold01071: 45332-48854
orange1.1g003913m.g (1 of 1) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) C. sinensis v1.1 3387   scaffold00248: 172060-175446
AT2G15820 (1 of 1) PF01535//PF03161 - PPR repeat (PPR) // LAGLIDADG DNA endonuclease family (LAGLIDADG_2) A. thaliana TAIR10 OTP51 2821   Chr2: 6888540-6891360
Thhalv10022548m.g (1 of 1) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) E. salsugineum v1.0 3442   scaffold_11: 4450077-4453518
Ciclev10027854m.g (1 of 1) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) C. clementina v1.0 3497   scaffold_8: 3649396-3652892
Lus10012055.g (1 of 2) PF01535//PF03161 - PPR repeat (PPR) // LAGLIDADG DNA endonuclease family (LAGLIDADG_2) L. usitatissimum v1.0 2593   scaffold931: 350236-352828
Gorai.002G007000 (1 of 1) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) G. raimondii v2.1 3352   Chr02: 440625-443976
Thecc1EG006996 (1 of 1) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) T. cacao v1.1 4020   scaffold_2: 4762960-4766979
Migut.B00306 (1 of 1) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) M. guttatus v2.0 2575   scaffold_2: 1410355-1412929
Cagra.1714s0001 (1 of 1) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) C. grandiflora v1.1 2409   Scaffold1714: 5012-7420
Glyma.07G178800 (1 of 1) PF01535//PF03161 - PPR repeat (PPR) // LAGLIDADG DNA endonuclease family (LAGLIDADG_2) G. max Wm82.a2.v1 4430   Chr07: 34242810-34247239
Glyma.20G009700 (1 of 1) PF01535//PF03161//PF13812 - PPR repeat (PPR) // LAGLIDADG DNA endonuclease family (LAGLIDADG_2) // Pentatricopeptide repeat domain (PPR_3) G. max Wm82.a2.v1 3477   Chr20: 847971-851447
Brara.G00360 (1 of 1) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) B. rapa FPsc v1.3 2726   A07: 3560920-3563645
Bostr.18351s0066 (1 of 1) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) B. stricta v1.2 2818   Scaffold18351: 641021-643838
Medtr1g026035 (1 of 2) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) M. truncatula Mt4.0v1 2952   chr1: 8385143-8388094
Medtr0381s0010 (1 of 2) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) M. truncatula Mt4.0v1 1831   scaffold0381: 66-1896
SapurV1A.0090s0460 (1 of 1) PF01535//PF03161 - PPR repeat (PPR) // LAGLIDADG DNA endonuclease family (LAGLIDADG_2) S. purpurea v1.0 3355   chr09: 8843081-8846435
evm_27.TU.AmTr_v1.0_scaffold00002.314 (1 of 1) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) A. trichopoda v1.0 2701   AmTr_v1.0_scaffold00002: 5755570-5758270
Traes_6AL_328012CF3 (1 of 2) PF01535//PF03161//PF13812 - PPR repeat (PPR) // LAGLIDADG DNA endonuclease family (LAGLIDADG_2) // Pentatricopeptide repeat domain (PPR_3) T. aestivum v2.2 4311   ta_iwgsc_6al_v1_5743835: 5645-9955
Traes_6BL_E5AD7E62F (1 of 1) PF01535//PF03161 - PPR repeat (PPR) // LAGLIDADG DNA endonuclease family (LAGLIDADG_2) T. aestivum v2.2 3465   ta_iwgsc_6bl_v1_4221450: 10-3474
Traes_6DL_B7D1F212A (1 of 2) PF01535//PF03161//PF13812 - PPR repeat (PPR) // LAGLIDADG DNA endonuclease family (LAGLIDADG_2) // Pentatricopeptide repeat domain (PPR_3) T. aestivum v2.2 4272   ta_iwgsc_6dl_v1_2892282: 846-5117
Eucgr.L01320 (1 of 2) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) E. grandis v2.0 3431   scaffold_167: 35406-38836
Prupe.8G116000 (1 of 1) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) P. persica v2.1 2796   Pp08: 14315298-14318093
GSMUA_AchrUn_randomG19500_001 (1 of 1) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) M. acuminata v1 6808   chrUn_random: 93548724-93555531
Manes.17G094600 (1 of 1) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) M. esculenta v6.1 3344   Chromosome17: 23728621-23731964
Kalax.1239s0002 (1 of 2) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) K. laxiflora v1.1 3769   scaffold_1239: 18704-22472
Kalax.0558s0021 (1 of 2) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) K. laxiflora v1.1 3249   scaffold_558: 158764-162012
Seita.1G287400 (1 of 1) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) S. italica v2.2 2894   scaffold_1: 35707910-35710803
Bradi3g52580 (1 of 1) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) B. distachyon v3.1 3289   Bd3: 53233432-53236720

69 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Ciclev10027854m C. clementina v1.0 122047377 endonucleases 1 5273 Angiosperm
Lus10012055 L. usitatissimum v1.0 122047377 endonucleases 1 5273 Angiosperm
Cagra.1714s0001.1.p C. grandiflora v1.1 122047377 endonucleases 1 5273 Angiosperm
Migut.B00306.1.p M. guttatus v2.0 122047377 endonucleases 1 5273 Angiosperm
Brara.G00360.1.p B. rapa FPsc v1.3 122047377 endonucleases 1 5273 Angiosperm
Medtr0381s0010.1 M. truncatula Mt4.0v1 122047377 endonucleases 2 5273 Angiosperm
SapurV1A.0090s0460.1.p S. purpurea v1.0 122047377 endonucleases 1 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00002.314 A. trichopoda v1.0 122047377 endonucleases 1 5273 Angiosperm
Traes_6DL_B7D1F212A.1 T. aestivum v2.2 122047377 endonucleases 3 5273 Angiosperm
Traes_6BL_E5AD7E62F.1 T. aestivum v2.2 122047377 endonucleases 3 5273 Angiosperm
Traes_6AL_328012CF3.2 T. aestivum v2.2 122047377 endonucleases 3 5273 Angiosperm
GSMUA_AchrUn_randomP19500_001 M. acuminata v1 122047377 endonucleases 1 5273 Angiosperm
Kalax.1239s0002.1.p K. laxiflora v1.1 122047377 endonucleases 2 5273 Angiosperm
Kalax.0558s0021.1.p K. laxiflora v1.1 122047377 endonucleases 2 5273 Angiosperm
Seita.1G287400.1.p S. italica v2.2 122047377 endonucleases 1 5273 Angiosperm
Bradi3g52580.1.p B. distachyon v3.1 122047377 endonucleases 1 5273 Angiosperm
Brast04G093200.1.p B. stacei v1.1 122047377 endonucleases 1 5273 Angiosperm
Aco017243.1 A. comosus v3 122047377 endonucleases 1 5273 Angiosperm
Aqcoe3G349900.1.p A. coerulea v3.1 122047377 endonucleases 1 5273 Angiosperm
LOC_Os02g47360.1 O. sativa v7.0 122047377 endonucleases 1 5273 Angiosperm
Zosma81g00380.1 Z. marina v2.2 122047377 endonucleases 1 5273 Angiosperm
Kaladp0033s0260.1.p K. fedtschenkoi v1.1 122047377 endonucleases 1 5273 Angiosperm
Tp57577_TGAC_v2_mRNA16042 T. pratense v2 122047377 endonucleases 2 5273 Angiosperm
Podel.09G109600.1.p P. deltoides WV94 v2.1 122047377 endonucleases 1 5273 Angiosperm
PGSC0003DMP400046090 S. tuberosum v4.03 122047377 endonucleases 1 5273 Angiosperm
Pavir.1NG443100.1.p P. virgatum v4.1 122047377 endonucleases 2 5273 Angiosperm
Pavir.1KG465700.1.p P. virgatum v4.1 122047377 endonucleases 2 5273 Angiosperm
Oeu057674.1 O. europaea v1.0 122047377 endonucleases 1 5273 Angiosperm
Sobic.004G269600.1.p S. bicolor v3.1.1 122047377 endonucleases 1 5273 Angiosperm
VIT_203s0063g00900.2 V. vinifera v2.1 122047377 endonucleases 1 5273 Angiosperm