Gene : Medtr0381s0010 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) Description:  PPR containing plant-like protein
Genomic Order:  1 Name:  ? Medtr0381s0010
Secondary Identifier:  ? PAC:31101258
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0381s0010 0.5kb upstream 0.5kb upstream 1896 true scaffold0381: 1-1896 Medicago truncatula
Medtr0381s0010 0.5kb upstream 0.5kb upstream 65 false scaffold0381: 1-65 Medicago truncatula
Medtr0381s0010 0.5kb downstream 0.5kb downstream 2331 true scaffold0381: 66-2396 Medicago truncatula
Medtr0381s0010 0.5kb downstream 0.5kb downstream 500 false scaffold0381: 1897-2396 Medicago truncatula
Medtr0381s0010 1.0kb upstream 1.0kb upstream 1896 true scaffold0381: 1-1896 Medicago truncatula
Medtr0381s0010 1.0kb upstream 1.0kb upstream 65 false scaffold0381: 1-65 Medicago truncatula
Medtr0381s0010 1.0kb downstream 1.0kb downstream 2831 true scaffold0381: 66-2896 Medicago truncatula
Medtr0381s0010 1.0kb downstream 1.0kb downstream 1000 false scaffold0381: 1897-2896 Medicago truncatula
Medtr0381s0010 2.0kb upstream 2.0kb upstream 1896 true scaffold0381: 1-1896 Medicago truncatula
Medtr0381s0010 2.0kb upstream 2.0kb upstream 65 false scaffold0381: 1-65 Medicago truncatula
Medtr0381s0010 2.0kb downstream 2.0kb downstream 3831 true scaffold0381: 66-3896 Medicago truncatula
Medtr0381s0010 2.0kb downstream 2.0kb downstream 2000 false scaffold0381: 1897-3896 Medicago truncatula
Medtr0381s0010 5.0kb upstream 5.0kb upstream 1896 true scaffold0381: 1-1896 Medicago truncatula
Medtr0381s0010 5.0kb upstream 5.0kb upstream 65 false scaffold0381: 1-65 Medicago truncatula
Medtr0381s0010 5.0kb downstream 5.0kb downstream 6831 true scaffold0381: 66-6896 Medicago truncatula
Medtr0381s0010 5.0kb downstream 5.0kb downstream 5000 false scaffold0381: 1897-6896 Medicago truncatula
Medtr0381s0010 10.0kb upstream 10.0kb upstream 1896 true scaffold0381: 1-1896 Medicago truncatula
Medtr0381s0010 10.0kb upstream 10.0kb upstream 65 false scaffold0381: 1-65 Medicago truncatula
Medtr0381s0010 10.0kb downstream 10.0kb downstream 11831 true scaffold0381: 66-11896 Medicago truncatula
Medtr0381s0010 10.0kb downstream 10.0kb downstream 10000 false scaffold0381: 1897-11896 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306317 5265 Fabidae View MSA
124062766 5270 Rosid View MSA
123737498 5271 Pentapetalae View MSA
122787562 5272 Eudicot View MSA
122047377 5273 Angiosperm View MSA
121348028 5274 Embryophyte View MSA
123380709 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain