Protein Family : endonucleases 123380709

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  74
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74 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
438810 (1 of 1) PF01535//PF03161//PF13812 - PPR repeat (PPR) // LAGLIDADG DNA endonuclease family (LAGLIDADG_2) // Pentatricopeptide repeat domain (PPR_3) S. moellendorffii v1.0 2839   scaffold_4: 1639233-1642071
29780.t000007 (1 of 1) PF01535//PF03161 - PPR repeat (PPR) // LAGLIDADG DNA endonuclease family (LAGLIDADG_2) R. communis v0.1 3084   29780: 68124-71207
Cucsa.140270 (1 of 1) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) C. sativus v1.0 3523   scaffold01071: 45332-48854
orange1.1g003913m.g (1 of 1) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) C. sinensis v1.1 3387   scaffold00248: 172060-175446
AT2G15820 (1 of 1) PF01535//PF03161 - PPR repeat (PPR) // LAGLIDADG DNA endonuclease family (LAGLIDADG_2) A. thaliana TAIR10 OTP51 2821   Chr2: 6888540-6891360
Thhalv10022548m.g (1 of 1) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) E. salsugineum v1.0 3442   scaffold_11: 4450077-4453518
Ciclev10027854m.g (1 of 1) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) C. clementina v1.0 3497   scaffold_8: 3649396-3652892
Lus10012055.g (1 of 2) PF01535//PF03161 - PPR repeat (PPR) // LAGLIDADG DNA endonuclease family (LAGLIDADG_2) L. usitatissimum v1.0 2593   scaffold931: 350236-352828
Gorai.002G007000 (1 of 1) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) G. raimondii v2.1 3352   Chr02: 440625-443976
Thecc1EG006996 (1 of 1) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) T. cacao v1.1 4020   scaffold_2: 4762960-4766979
Migut.B00306 (1 of 1) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) M. guttatus v2.0 2575   scaffold_2: 1410355-1412929
Cagra.1714s0001 (1 of 1) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) C. grandiflora v1.1 2409   Scaffold1714: 5012-7420
Glyma.07G178800 (1 of 1) PF01535//PF03161 - PPR repeat (PPR) // LAGLIDADG DNA endonuclease family (LAGLIDADG_2) G. max Wm82.a2.v1 4430   Chr07: 34242810-34247239
Glyma.20G009700 (1 of 1) PF01535//PF03161//PF13812 - PPR repeat (PPR) // LAGLIDADG DNA endonuclease family (LAGLIDADG_2) // Pentatricopeptide repeat domain (PPR_3) G. max Wm82.a2.v1 3477   Chr20: 847971-851447
Brara.G00360 (1 of 1) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) B. rapa FPsc v1.3 2726   A07: 3560920-3563645
Bostr.18351s0066 (1 of 1) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) B. stricta v1.2 2818   Scaffold18351: 641021-643838
Medtr1g026035 (1 of 2) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) M. truncatula Mt4.0v1 2952   chr1: 8385143-8388094
Medtr0381s0010 (1 of 2) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) M. truncatula Mt4.0v1 1831   scaffold0381: 66-1896
SapurV1A.0090s0460 (1 of 1) PF01535//PF03161 - PPR repeat (PPR) // LAGLIDADG DNA endonuclease family (LAGLIDADG_2) S. purpurea v1.0 3355   chr09: 8843081-8846435
evm_27.TU.AmTr_v1.0_scaffold00002.314 (1 of 1) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) A. trichopoda v1.0 2701   AmTr_v1.0_scaffold00002: 5755570-5758270
Traes_6AL_328012CF3 (1 of 2) PF01535//PF03161//PF13812 - PPR repeat (PPR) // LAGLIDADG DNA endonuclease family (LAGLIDADG_2) // Pentatricopeptide repeat domain (PPR_3) T. aestivum v2.2 4311   ta_iwgsc_6al_v1_5743835: 5645-9955
Traes_6BL_E5AD7E62F (1 of 1) PF01535//PF03161 - PPR repeat (PPR) // LAGLIDADG DNA endonuclease family (LAGLIDADG_2) T. aestivum v2.2 3465   ta_iwgsc_6bl_v1_4221450: 10-3474
Traes_6DL_B7D1F212A (1 of 2) PF01535//PF03161//PF13812 - PPR repeat (PPR) // LAGLIDADG DNA endonuclease family (LAGLIDADG_2) // Pentatricopeptide repeat domain (PPR_3) T. aestivum v2.2 4272   ta_iwgsc_6dl_v1_2892282: 846-5117
Eucgr.L01320 (1 of 2) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) E. grandis v2.0 3431   scaffold_167: 35406-38836
Prupe.8G116000 (1 of 1) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) P. persica v2.1 2796   Pp08: 14315298-14318093
GSMUA_AchrUn_randomG19500_001 (1 of 1) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) M. acuminata v1 6808   chrUn_random: 93548724-93555531
Manes.17G094600 (1 of 1) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) M. esculenta v6.1 3344   Chromosome17: 23728621-23731964
Kalax.1239s0002 (1 of 2) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) K. laxiflora v1.1 3769   scaffold_1239: 18704-22472
Kalax.0558s0021 (1 of 2) PF03161 - LAGLIDADG DNA endonuclease family (LAGLIDADG_2) K. laxiflora v1.1 3249   scaffold_558: 158764-162012
Sphfalx0039s0079 (1 of 1) PF01535//PF03161//PF13041//PF13812 - PPR repeat (PPR) // LAGLIDADG DNA endonuclease family (LAGLIDADG_2) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) S. fallax v0.5 5453   super_39: 1353647-1359099

74 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
438810 S. moellendorffii v1.0 123380709 endonucleases 1 5275 Viridiplantae
29780.m001321 R. communis v0.1 123380709 endonucleases 1 5275 Viridiplantae
Cucsa.140270.1 C. sativus v1.0 123380709 endonucleases 1 5275 Viridiplantae
orange1.1g003913m C. sinensis v1.1 123380709 endonucleases 1 5275 Viridiplantae
AT2G15820.1 A. thaliana TAIR10 123380709 endonucleases 1 5275 Viridiplantae
Thhalv10022548m E. salsugineum v1.0 123380709 endonucleases 1 5275 Viridiplantae
Ciclev10027854m C. clementina v1.0 123380709 endonucleases 1 5275 Viridiplantae
Lus10012055 L. usitatissimum v1.0 123380709 endonucleases 1 5275 Viridiplantae
Gorai.002G007000.1 G. raimondii v2.1 123380709 endonucleases 1 5275 Viridiplantae
Thecc1EG006996t1 T. cacao v1.1 123380709 endonucleases 1 5275 Viridiplantae
Migut.B00306.1.p M. guttatus v2.0 123380709 endonucleases 1 5275 Viridiplantae
Cagra.1714s0001.1.p C. grandiflora v1.1 123380709 endonucleases 1 5275 Viridiplantae
Glyma.20G009700.1.p G. max Wm82.a2.v1 123380709 endonucleases 2 5275 Viridiplantae
Glyma.07G178800.1.p G. max Wm82.a2.v1 123380709 endonucleases 2 5275 Viridiplantae
Brara.G00360.1.p B. rapa FPsc v1.3 123380709 endonucleases 1 5275 Viridiplantae
Bostr.18351s0066.1.p B. stricta v1.2 123380709 endonucleases 1 5275 Viridiplantae
Medtr1g026035.1 M. truncatula Mt4.0v1 123380709 endonucleases 2 5275 Viridiplantae
Medtr0381s0010.1 M. truncatula Mt4.0v1 123380709 endonucleases 2 5275 Viridiplantae
SapurV1A.0090s0460.1.p S. purpurea v1.0 123380709 endonucleases 1 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00002.314 A. trichopoda v1.0 123380709 endonucleases 1 5275 Viridiplantae
Traes_6BL_E5AD7E62F.1 T. aestivum v2.2 123380709 endonucleases 3 5275 Viridiplantae
Traes_6AL_328012CF3.2 T. aestivum v2.2 123380709 endonucleases 3 5275 Viridiplantae
Traes_6DL_B7D1F212A.1 T. aestivum v2.2 123380709 endonucleases 3 5275 Viridiplantae
Eucgr.L01320.1.p E. grandis v2.0 123380709 endonucleases 1 5275 Viridiplantae
Prupe.8G116000.1.p P. persica v2.1 123380709 endonucleases 1 5275 Viridiplantae
GSMUA_AchrUn_randomP19500_001 M. acuminata v1 123380709 endonucleases 1 5275 Viridiplantae
Manes.17G094600.1.p M. esculenta v6.1 123380709 endonucleases 1 5275 Viridiplantae
Kalax.1239s0002.1.p K. laxiflora v1.1 123380709 endonucleases 2 5275 Viridiplantae
Kalax.0558s0021.1.p K. laxiflora v1.1 123380709 endonucleases 2 5275 Viridiplantae
Sphfalx0039s0079.1.p S. fallax v0.5 123380709 endonucleases 1 5275 Viridiplantae