Gene : Medtr1g072370 M. truncatula Mt4.0v1
Defline:  (1 of 2) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs Description:  small nuclear ribonucleoprotein
Genomic Order:  3871 Name:  ? Medtr1g072370
Secondary Identifier:  ? PAC:31100093
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g072370 0.5kb upstream 0.5kb upstream 4953 true chr1: 32120319-32125271 Medicago truncatula
Medtr1g072370 0.5kb upstream 0.5kb upstream 500 false chr1: 32124772-32125271 Medicago truncatula
Medtr1g072370 0.5kb downstream 0.5kb downstream 4953 true chr1: 32119819-32124771 Medicago truncatula
Medtr1g072370 0.5kb downstream 0.5kb downstream 500 false chr1: 32119819-32120318 Medicago truncatula
Medtr1g072370 1.0kb upstream 1.0kb upstream 5453 true chr1: 32120319-32125771 Medicago truncatula
Medtr1g072370 1.0kb upstream 1.0kb upstream 1000 false chr1: 32124772-32125771 Medicago truncatula
Medtr1g072370 1.0kb downstream 1.0kb downstream 5453 true chr1: 32119319-32124771 Medicago truncatula
Medtr1g072370 1.0kb downstream 1.0kb downstream 1000 false chr1: 32119319-32120318 Medicago truncatula
Medtr1g072370 2.0kb upstream 2.0kb upstream 6453 true chr1: 32120319-32126771 Medicago truncatula
Medtr1g072370 2.0kb upstream 2.0kb upstream 2000 false chr1: 32124772-32126771 Medicago truncatula
Medtr1g072370 2.0kb downstream 2.0kb downstream 6453 true chr1: 32118319-32124771 Medicago truncatula
Medtr1g072370 2.0kb downstream 2.0kb downstream 2000 false chr1: 32118319-32120318 Medicago truncatula
Medtr1g072370 5.0kb upstream 5.0kb upstream 9453 true chr1: 32120319-32129771 Medicago truncatula
Medtr1g072370 5.0kb upstream 5.0kb upstream 5000 false chr1: 32124772-32129771 Medicago truncatula
Medtr1g072370 5.0kb downstream 5.0kb downstream 9453 true chr1: 32115319-32124771 Medicago truncatula
Medtr1g072370 5.0kb downstream 5.0kb downstream 5000 false chr1: 32115319-32120318 Medicago truncatula
Medtr1g072370 10.0kb upstream 10.0kb upstream 14453 true chr1: 32120319-32134771 Medicago truncatula
Medtr1g072370 10.0kb upstream 10.0kb upstream 10000 false chr1: 32124772-32134771 Medicago truncatula
Medtr1g072370 10.0kb downstream 10.0kb downstream 14453 true chr1: 32110319-32124771 Medicago truncatula
Medtr1g072370 10.0kb downstream 10.0kb downstream 10000 false chr1: 32110319-32120318 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314520 5265 Fabidae View MSA
124060560 5270 Rosid View MSA
123750770 5271 Pentapetalae View MSA
122792948 5272 Eudicot View MSA
122045867 5273 Angiosperm View MSA
121351003 5274 Embryophyte View MSA
123426098 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.337        
cufflinks 6.825        
cufflinks 10.329     High  
cufflinks 42.911     High High
cufflinks 9.841        
cufflinks 76.357     High High
cufflinks 11.426     High  
cufflinks 8.71        
cufflinks 22.682     High  

0 Strain