Gene : Medtr1g083120 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12549:SF17 - WRC, ZF-4CXXC-R1 TRANSCRIPTION FACTOR AND JUMONJI DOMAIN-CONTAINING PROTEIN Description:  transcription factor jumonji domain protein
Genomic Order:  4529 Name:  ? Medtr1g083120
Secondary Identifier:  ? PAC:31092898
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g083120 0.5kb upstream 0.5kb upstream 8671 true chr1: 36993703-37002373 Medicago truncatula
Medtr1g083120 0.5kb upstream 0.5kb upstream 500 false chr1: 37001874-37002373 Medicago truncatula
Medtr1g083120 0.5kb downstream 0.5kb downstream 8671 true chr1: 36993203-37001873 Medicago truncatula
Medtr1g083120 0.5kb downstream 0.5kb downstream 500 false chr1: 36993203-36993702 Medicago truncatula
Medtr1g083120 1.0kb upstream 1.0kb upstream 9171 true chr1: 36993703-37002873 Medicago truncatula
Medtr1g083120 1.0kb upstream 1.0kb upstream 1000 false chr1: 37001874-37002873 Medicago truncatula
Medtr1g083120 1.0kb downstream 1.0kb downstream 9171 true chr1: 36992703-37001873 Medicago truncatula
Medtr1g083120 1.0kb downstream 1.0kb downstream 1000 false chr1: 36992703-36993702 Medicago truncatula
Medtr1g083120 2.0kb upstream 2.0kb upstream 10171 true chr1: 36993703-37003873 Medicago truncatula
Medtr1g083120 2.0kb upstream 2.0kb upstream 2000 false chr1: 37001874-37003873 Medicago truncatula
Medtr1g083120 2.0kb downstream 2.0kb downstream 10171 true chr1: 36991703-37001873 Medicago truncatula
Medtr1g083120 2.0kb downstream 2.0kb downstream 2000 false chr1: 36991703-36993702 Medicago truncatula
Medtr1g083120 5.0kb upstream 5.0kb upstream 13171 true chr1: 36993703-37006873 Medicago truncatula
Medtr1g083120 5.0kb upstream 5.0kb upstream 5000 false chr1: 37001874-37006873 Medicago truncatula
Medtr1g083120 5.0kb downstream 5.0kb downstream 13171 true chr1: 36988703-37001873 Medicago truncatula
Medtr1g083120 5.0kb downstream 5.0kb downstream 5000 false chr1: 36988703-36993702 Medicago truncatula
Medtr1g083120 10.0kb upstream 10.0kb upstream 18171 true chr1: 36993703-37011873 Medicago truncatula
Medtr1g083120 10.0kb upstream 10.0kb upstream 10000 false chr1: 37001874-37011873 Medicago truncatula
Medtr1g083120 10.0kb downstream 10.0kb downstream 18171 true chr1: 36983703-37001873 Medicago truncatula
Medtr1g083120 10.0kb downstream 10.0kb downstream 10000 false chr1: 36983703-36993702 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300928 5265 Fabidae View MSA
124066315 5270 Rosid View MSA
123739621 5271 Pentapetalae View MSA
122793183 5272 Eudicot View MSA
122050393 5273 Angiosperm View MSA
121349542 5274 Embryophyte View MSA
123425923 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.897        
cufflinks 0.844        
cufflinks 0.863        
cufflinks 0.136       Low
cufflinks 1.08       High
cufflinks 0.125     Low Low
cufflinks 0.346        
cufflinks 0.782        
cufflinks 0.243        

0 Strain