Gene : Medtr3g435580 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR33415:SF3 - EMB514 Description:  DUF3223 family protein
Genomic Order:  1371 Name:  ? Medtr3g435580
Secondary Identifier:  ? PAC:31054390
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g435580 0.5kb upstream 0.5kb upstream 2966 true chr3: 11682018-11684983 Medicago truncatula
Medtr3g435580 0.5kb upstream 0.5kb upstream 500 false chr3: 11684484-11684983 Medicago truncatula
Medtr3g435580 0.5kb downstream 0.5kb downstream 2966 true chr3: 11681518-11684483 Medicago truncatula
Medtr3g435580 0.5kb downstream 0.5kb downstream 500 false chr3: 11681518-11682017 Medicago truncatula
Medtr3g435580 1.0kb upstream 1.0kb upstream 3466 true chr3: 11682018-11685483 Medicago truncatula
Medtr3g435580 1.0kb upstream 1.0kb upstream 1000 false chr3: 11684484-11685483 Medicago truncatula
Medtr3g435580 1.0kb downstream 1.0kb downstream 3466 true chr3: 11681018-11684483 Medicago truncatula
Medtr3g435580 1.0kb downstream 1.0kb downstream 1000 false chr3: 11681018-11682017 Medicago truncatula
Medtr3g435580 2.0kb upstream 2.0kb upstream 4466 true chr3: 11682018-11686483 Medicago truncatula
Medtr3g435580 2.0kb upstream 2.0kb upstream 2000 false chr3: 11684484-11686483 Medicago truncatula
Medtr3g435580 2.0kb downstream 2.0kb downstream 4466 true chr3: 11680018-11684483 Medicago truncatula
Medtr3g435580 2.0kb downstream 2.0kb downstream 2000 false chr3: 11680018-11682017 Medicago truncatula
Medtr3g435580 5.0kb upstream 5.0kb upstream 7466 true chr3: 11682018-11689483 Medicago truncatula
Medtr3g435580 5.0kb upstream 5.0kb upstream 5000 false chr3: 11684484-11689483 Medicago truncatula
Medtr3g435580 5.0kb downstream 5.0kb downstream 7466 true chr3: 11677018-11684483 Medicago truncatula
Medtr3g435580 5.0kb downstream 5.0kb downstream 5000 false chr3: 11677018-11682017 Medicago truncatula
Medtr3g435580 10.0kb upstream 10.0kb upstream 12466 true chr3: 11682018-11694483 Medicago truncatula
Medtr3g435580 10.0kb upstream 10.0kb upstream 10000 false chr3: 11684484-11694483 Medicago truncatula
Medtr3g435580 10.0kb downstream 10.0kb downstream 12466 true chr3: 11672018-11684483 Medicago truncatula
Medtr3g435580 10.0kb downstream 10.0kb downstream 10000 false chr3: 11672018-11682017 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300763 5265 Fabidae View MSA
124063233 5270 Rosid View MSA
123742093 5271 Pentapetalae View MSA
122792599 5272 Eudicot View MSA
122051410 5273 Angiosperm View MSA
121348604 5274 Embryophyte View MSA
123426725 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.265     High  
cufflinks 8.739       Low
cufflinks 10.318     High  
cufflinks 20.86     High High
cufflinks 12.852     High  
cufflinks 12.295     High  
cufflinks 14.224     High  
cufflinks 9.922     High  
cufflinks 19.703     High High

0 Strain