Gene : Medtr4g022700 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR33180:SF4 - PHOTOSYSTEM II CP43 CHLOROPHYLL APOPROTEIN Description:  photosystem II CP43 chlorophyll apoprotein
Genomic Order:  996 Name:  ? Medtr4g022700
Secondary Identifier:  ? PAC:31111611
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g022700 0.5kb upstream 0.5kb upstream 1043 true chr4: 7610605-7611647 Medicago truncatula
Medtr4g022700 0.5kb upstream 0.5kb upstream 500 false chr4: 7611148-7611647 Medicago truncatula
Medtr4g022700 0.5kb downstream 0.5kb downstream 1043 true chr4: 7610105-7611147 Medicago truncatula
Medtr4g022700 0.5kb downstream 0.5kb downstream 500 false chr4: 7610105-7610604 Medicago truncatula
Medtr4g022700 1.0kb upstream 1.0kb upstream 1543 true chr4: 7610605-7612147 Medicago truncatula
Medtr4g022700 1.0kb upstream 1.0kb upstream 1000 false chr4: 7611148-7612147 Medicago truncatula
Medtr4g022700 1.0kb downstream 1.0kb downstream 1543 true chr4: 7609605-7611147 Medicago truncatula
Medtr4g022700 1.0kb downstream 1.0kb downstream 1000 false chr4: 7609605-7610604 Medicago truncatula
Medtr4g022700 2.0kb upstream 2.0kb upstream 2543 true chr4: 7610605-7613147 Medicago truncatula
Medtr4g022700 2.0kb upstream 2.0kb upstream 2000 false chr4: 7611148-7613147 Medicago truncatula
Medtr4g022700 2.0kb downstream 2.0kb downstream 2543 true chr4: 7608605-7611147 Medicago truncatula
Medtr4g022700 2.0kb downstream 2.0kb downstream 2000 false chr4: 7608605-7610604 Medicago truncatula
Medtr4g022700 5.0kb upstream 5.0kb upstream 5543 true chr4: 7610605-7616147 Medicago truncatula
Medtr4g022700 5.0kb upstream 5.0kb upstream 5000 false chr4: 7611148-7616147 Medicago truncatula
Medtr4g022700 5.0kb downstream 5.0kb downstream 5543 true chr4: 7605605-7611147 Medicago truncatula
Medtr4g022700 5.0kb downstream 5.0kb downstream 5000 false chr4: 7605605-7610604 Medicago truncatula
Medtr4g022700 10.0kb upstream 10.0kb upstream 10543 true chr4: 7610605-7621147 Medicago truncatula
Medtr4g022700 10.0kb upstream 10.0kb upstream 10000 false chr4: 7611148-7621147 Medicago truncatula
Medtr4g022700 10.0kb downstream 10.0kb downstream 10543 true chr4: 7600605-7611147 Medicago truncatula
Medtr4g022700 10.0kb downstream 10.0kb downstream 10000 false chr4: 7600605-7610604 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122262309 5265 Fabidae Singleton cluster - no MSA
124039438 5270 Rosid View MSA
123752529 5271 Pentapetalae View MSA
122774617 5272 Eudicot View MSA
122048462 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121310978 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain