Gene : Medtr4g070190 M. truncatula Mt4.0v1
Defline:  (1 of 243) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Description:  RNA-binding (RRM/RBD/RNP motif) family protein
Genomic Order:  3204 Name:  ? Medtr4g070190
Secondary Identifier:  ? PAC:31112711
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g070190 0.5kb upstream 0.5kb upstream 1719 true chr4: 26418280-26419998 Medicago truncatula
Medtr4g070190 0.5kb upstream 0.5kb upstream 500 false chr4: 26418280-26418779 Medicago truncatula
Medtr4g070190 0.5kb downstream 0.5kb downstream 1719 true chr4: 26418780-26420498 Medicago truncatula
Medtr4g070190 0.5kb downstream 0.5kb downstream 500 false chr4: 26419999-26420498 Medicago truncatula
Medtr4g070190 1.0kb upstream 1.0kb upstream 2219 true chr4: 26417780-26419998 Medicago truncatula
Medtr4g070190 1.0kb upstream 1.0kb upstream 1000 false chr4: 26417780-26418779 Medicago truncatula
Medtr4g070190 1.0kb downstream 1.0kb downstream 2219 true chr4: 26418780-26420998 Medicago truncatula
Medtr4g070190 1.0kb downstream 1.0kb downstream 1000 false chr4: 26419999-26420998 Medicago truncatula
Medtr4g070190 2.0kb upstream 2.0kb upstream 3219 true chr4: 26416780-26419998 Medicago truncatula
Medtr4g070190 2.0kb upstream 2.0kb upstream 2000 false chr4: 26416780-26418779 Medicago truncatula
Medtr4g070190 2.0kb downstream 2.0kb downstream 3219 true chr4: 26418780-26421998 Medicago truncatula
Medtr4g070190 2.0kb downstream 2.0kb downstream 2000 false chr4: 26419999-26421998 Medicago truncatula
Medtr4g070190 5.0kb upstream 5.0kb upstream 6219 true chr4: 26413780-26419998 Medicago truncatula
Medtr4g070190 5.0kb upstream 5.0kb upstream 5000 false chr4: 26413780-26418779 Medicago truncatula
Medtr4g070190 5.0kb downstream 5.0kb downstream 6219 true chr4: 26418780-26424998 Medicago truncatula
Medtr4g070190 5.0kb downstream 5.0kb downstream 5000 false chr4: 26419999-26424998 Medicago truncatula
Medtr4g070190 10.0kb upstream 10.0kb upstream 11219 true chr4: 26408780-26419998 Medicago truncatula
Medtr4g070190 10.0kb upstream 10.0kb upstream 10000 false chr4: 26408780-26418779 Medicago truncatula
Medtr4g070190 10.0kb downstream 10.0kb downstream 11219 true chr4: 26418780-26429998 Medicago truncatula
Medtr4g070190 10.0kb downstream 10.0kb downstream 10000 false chr4: 26419999-26429998 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313595 5265 Fabidae View MSA
124065859 5270 Rosid View MSA
123753688 5271 Pentapetalae View MSA
122793597 5272 Eudicot View MSA
122051373 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349952 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 357.77     High High
cufflinks 38.028     High Low
cufflinks 94.318     High  
cufflinks 194.831     High  
cufflinks 169.367     High  
cufflinks 120.931     High  
cufflinks 88.92     High  
cufflinks 64.876     High  
cufflinks 56.019     High  

0 Strain