Gene : Medtr4g094695 M. truncatula Mt4.0v1
Defline:  (1 of 7) PF00122//PF00403//PF12710 - E1-E2 ATPase (E1-E2_ATPase) // Heavy-metal-associated domain (HMA) // haloacid dehalogenase-like hydrolase (HAD) Description:  heavy metal P-type ATPase
Genomic Order:  4932 Name:  ? Medtr4g094695
Secondary Identifier:  ? PAC:31107400
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g094695 0.5kb upstream 0.5kb upstream 7040 true chr4: 38743254-38750293 Medicago truncatula
Medtr4g094695 0.5kb upstream 0.5kb upstream 500 false chr4: 38743254-38743753 Medicago truncatula
Medtr4g094695 0.5kb downstream 0.5kb downstream 7040 true chr4: 38743754-38750793 Medicago truncatula
Medtr4g094695 0.5kb downstream 0.5kb downstream 500 false chr4: 38750294-38750793 Medicago truncatula
Medtr4g094695 1.0kb upstream 1.0kb upstream 7540 true chr4: 38742754-38750293 Medicago truncatula
Medtr4g094695 1.0kb upstream 1.0kb upstream 1000 false chr4: 38742754-38743753 Medicago truncatula
Medtr4g094695 1.0kb downstream 1.0kb downstream 7540 true chr4: 38743754-38751293 Medicago truncatula
Medtr4g094695 1.0kb downstream 1.0kb downstream 1000 false chr4: 38750294-38751293 Medicago truncatula
Medtr4g094695 2.0kb upstream 2.0kb upstream 8540 true chr4: 38741754-38750293 Medicago truncatula
Medtr4g094695 2.0kb upstream 2.0kb upstream 2000 false chr4: 38741754-38743753 Medicago truncatula
Medtr4g094695 2.0kb downstream 2.0kb downstream 8540 true chr4: 38743754-38752293 Medicago truncatula
Medtr4g094695 2.0kb downstream 2.0kb downstream 2000 false chr4: 38750294-38752293 Medicago truncatula
Medtr4g094695 5.0kb upstream 5.0kb upstream 11540 true chr4: 38738754-38750293 Medicago truncatula
Medtr4g094695 5.0kb upstream 5.0kb upstream 5000 false chr4: 38738754-38743753 Medicago truncatula
Medtr4g094695 5.0kb downstream 5.0kb downstream 11540 true chr4: 38743754-38755293 Medicago truncatula
Medtr4g094695 5.0kb downstream 5.0kb downstream 5000 false chr4: 38750294-38755293 Medicago truncatula
Medtr4g094695 10.0kb upstream 10.0kb upstream 16540 true chr4: 38733754-38750293 Medicago truncatula
Medtr4g094695 10.0kb upstream 10.0kb upstream 10000 false chr4: 38733754-38743753 Medicago truncatula
Medtr4g094695 10.0kb downstream 10.0kb downstream 16540 true chr4: 38743754-38760293 Medicago truncatula
Medtr4g094695 10.0kb downstream 10.0kb downstream 10000 false chr4: 38750294-38760293 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311207 5265 Fabidae View MSA
124069200 5270 Rosid View MSA
123737302 5271 Pentapetalae View MSA
122788336 5272 Eudicot View MSA
122045942 5273 Angiosperm View MSA
121346195 5274 Embryophyte View MSA
123426796 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.4     High  
cufflinks 9.897     High  
cufflinks 12.874     High  
cufflinks 16.327     High  
cufflinks 7.455       Low
cufflinks 12.726     High  
cufflinks 34.064     High High
cufflinks 7.41       Low
cufflinks 50.582     High High

0 Strain