Gene : Medtr4g074440 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR15377 - TRANSCRIPTION FACTOR CA150B RELATED - TCERG1 Description:  pre-mRNA-processing protein 40C
Genomic Order:  3503 Name:  ? Medtr4g074440
Secondary Identifier:  ? PAC:31114961
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g074440 0.5kb upstream 0.5kb upstream 14713 true chr4: 28340046-28354758 Medicago truncatula
Medtr4g074440 0.5kb upstream 0.5kb upstream 500 false chr4: 28340046-28340545 Medicago truncatula
Medtr4g074440 0.5kb downstream 0.5kb downstream 14713 true chr4: 28340546-28355258 Medicago truncatula
Medtr4g074440 0.5kb downstream 0.5kb downstream 500 false chr4: 28354759-28355258 Medicago truncatula
Medtr4g074440 1.0kb upstream 1.0kb upstream 15213 true chr4: 28339546-28354758 Medicago truncatula
Medtr4g074440 1.0kb upstream 1.0kb upstream 1000 false chr4: 28339546-28340545 Medicago truncatula
Medtr4g074440 1.0kb downstream 1.0kb downstream 15213 true chr4: 28340546-28355758 Medicago truncatula
Medtr4g074440 1.0kb downstream 1.0kb downstream 1000 false chr4: 28354759-28355758 Medicago truncatula
Medtr4g074440 2.0kb upstream 2.0kb upstream 16213 true chr4: 28338546-28354758 Medicago truncatula
Medtr4g074440 2.0kb upstream 2.0kb upstream 2000 false chr4: 28338546-28340545 Medicago truncatula
Medtr4g074440 2.0kb downstream 2.0kb downstream 16213 true chr4: 28340546-28356758 Medicago truncatula
Medtr4g074440 2.0kb downstream 2.0kb downstream 2000 false chr4: 28354759-28356758 Medicago truncatula
Medtr4g074440 5.0kb upstream 5.0kb upstream 19213 true chr4: 28335546-28354758 Medicago truncatula
Medtr4g074440 5.0kb upstream 5.0kb upstream 5000 false chr4: 28335546-28340545 Medicago truncatula
Medtr4g074440 5.0kb downstream 5.0kb downstream 19213 true chr4: 28340546-28359758 Medicago truncatula
Medtr4g074440 5.0kb downstream 5.0kb downstream 5000 false chr4: 28354759-28359758 Medicago truncatula
Medtr4g074440 10.0kb upstream 10.0kb upstream 24213 true chr4: 28330546-28354758 Medicago truncatula
Medtr4g074440 10.0kb upstream 10.0kb upstream 10000 false chr4: 28330546-28340545 Medicago truncatula
Medtr4g074440 10.0kb downstream 10.0kb downstream 24213 true chr4: 28340546-28364758 Medicago truncatula
Medtr4g074440 10.0kb downstream 10.0kb downstream 10000 false chr4: 28354759-28364758 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304823 5265 Fabidae View MSA
124068165 5270 Rosid View MSA
123739157 5271 Pentapetalae View MSA
122793255 5272 Eudicot View MSA
122049454 5273 Angiosperm View MSA
121347556 5274 Embryophyte View MSA
123423988 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.764        
cufflinks 0.637        
cufflinks 0.658        
cufflinks 0.142       Low
cufflinks 0.911       High
cufflinks 0.076     Low Low
cufflinks 0.288        
cufflinks 0.541        
cufflinks 0.282        

0 Strain