Gene : Medtr5g091370 M. truncatula Mt4.0v1
Defline:  (1 of 6) PF06454 - Protein of unknown function (DUF1084) (DUF1084) Description:  plant/F17J16-140 protein
Genomic Order:  5230 Name:  ? Medtr5g091370
Secondary Identifier:  ? PAC:31091829
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g091370 0.5kb upstream 0.5kb upstream 4460 true chr5: 39819431-39823890 Medicago truncatula
Medtr5g091370 0.5kb upstream 0.5kb upstream 500 false chr5: 39819431-39819930 Medicago truncatula
Medtr5g091370 0.5kb downstream 0.5kb downstream 4460 true chr5: 39819931-39824390 Medicago truncatula
Medtr5g091370 0.5kb downstream 0.5kb downstream 500 false chr5: 39823891-39824390 Medicago truncatula
Medtr5g091370 1.0kb upstream 1.0kb upstream 4960 true chr5: 39818931-39823890 Medicago truncatula
Medtr5g091370 1.0kb upstream 1.0kb upstream 1000 false chr5: 39818931-39819930 Medicago truncatula
Medtr5g091370 1.0kb downstream 1.0kb downstream 4960 true chr5: 39819931-39824890 Medicago truncatula
Medtr5g091370 1.0kb downstream 1.0kb downstream 1000 false chr5: 39823891-39824890 Medicago truncatula
Medtr5g091370 2.0kb upstream 2.0kb upstream 5960 true chr5: 39817931-39823890 Medicago truncatula
Medtr5g091370 2.0kb upstream 2.0kb upstream 2000 false chr5: 39817931-39819930 Medicago truncatula
Medtr5g091370 2.0kb downstream 2.0kb downstream 5960 true chr5: 39819931-39825890 Medicago truncatula
Medtr5g091370 2.0kb downstream 2.0kb downstream 2000 false chr5: 39823891-39825890 Medicago truncatula
Medtr5g091370 5.0kb upstream 5.0kb upstream 8960 true chr5: 39814931-39823890 Medicago truncatula
Medtr5g091370 5.0kb upstream 5.0kb upstream 5000 false chr5: 39814931-39819930 Medicago truncatula
Medtr5g091370 5.0kb downstream 5.0kb downstream 8960 true chr5: 39819931-39828890 Medicago truncatula
Medtr5g091370 5.0kb downstream 5.0kb downstream 5000 false chr5: 39823891-39828890 Medicago truncatula
Medtr5g091370 10.0kb upstream 10.0kb upstream 13960 true chr5: 39809931-39823890 Medicago truncatula
Medtr5g091370 10.0kb upstream 10.0kb upstream 10000 false chr5: 39809931-39819930 Medicago truncatula
Medtr5g091370 10.0kb downstream 10.0kb downstream 13960 true chr5: 39819931-39833890 Medicago truncatula
Medtr5g091370 10.0kb downstream 10.0kb downstream 10000 false chr5: 39823891-39833890 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314325 5265 Fabidae View MSA
124063626 5270 Rosid View MSA
123737447 5271 Pentapetalae View MSA
122788593 5272 Eudicot View MSA
122046976 5273 Angiosperm View MSA
121346361 5274 Embryophyte View MSA
123380372 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.402       Low
cufflinks 1.39       High
cufflinks 0.843        
cufflinks 0.487        
cufflinks 1.136        
cufflinks 0.51        
cufflinks 1.133        
cufflinks 0.452       Low
cufflinks 0.812        

0 Strain