Gene : Medtr6g021730 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED Description:  E3 ubiquitin-protein ligase RGLG2-like protein
Genomic Order:  978 Name:  ? Medtr6g021730
Secondary Identifier:  ? PAC:31102903
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g021730 0.5kb upstream 0.5kb upstream 5563 true chr6: 7470524-7476086 Medicago truncatula
Medtr6g021730 0.5kb upstream 0.5kb upstream 500 false chr6: 7470524-7471023 Medicago truncatula
Medtr6g021730 0.5kb downstream 0.5kb downstream 5563 true chr6: 7471024-7476586 Medicago truncatula
Medtr6g021730 0.5kb downstream 0.5kb downstream 500 false chr6: 7476087-7476586 Medicago truncatula
Medtr6g021730 1.0kb upstream 1.0kb upstream 6063 true chr6: 7470024-7476086 Medicago truncatula
Medtr6g021730 1.0kb upstream 1.0kb upstream 1000 false chr6: 7470024-7471023 Medicago truncatula
Medtr6g021730 1.0kb downstream 1.0kb downstream 6063 true chr6: 7471024-7477086 Medicago truncatula
Medtr6g021730 1.0kb downstream 1.0kb downstream 1000 false chr6: 7476087-7477086 Medicago truncatula
Medtr6g021730 2.0kb upstream 2.0kb upstream 7063 true chr6: 7469024-7476086 Medicago truncatula
Medtr6g021730 2.0kb upstream 2.0kb upstream 2000 false chr6: 7469024-7471023 Medicago truncatula
Medtr6g021730 2.0kb downstream 2.0kb downstream 7063 true chr6: 7471024-7478086 Medicago truncatula
Medtr6g021730 2.0kb downstream 2.0kb downstream 2000 false chr6: 7476087-7478086 Medicago truncatula
Medtr6g021730 5.0kb upstream 5.0kb upstream 10063 true chr6: 7466024-7476086 Medicago truncatula
Medtr6g021730 5.0kb upstream 5.0kb upstream 5000 false chr6: 7466024-7471023 Medicago truncatula
Medtr6g021730 5.0kb downstream 5.0kb downstream 10063 true chr6: 7471024-7481086 Medicago truncatula
Medtr6g021730 5.0kb downstream 5.0kb downstream 5000 false chr6: 7476087-7481086 Medicago truncatula
Medtr6g021730 10.0kb upstream 10.0kb upstream 15063 true chr6: 7461024-7476086 Medicago truncatula
Medtr6g021730 10.0kb upstream 10.0kb upstream 10000 false chr6: 7461024-7471023 Medicago truncatula
Medtr6g021730 10.0kb downstream 10.0kb downstream 15063 true chr6: 7471024-7486086 Medicago truncatula
Medtr6g021730 10.0kb downstream 10.0kb downstream 10000 false chr6: 7476087-7486086 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301469 5265 Fabidae View MSA
124070395 5270 Rosid View MSA
123748343 5271 Pentapetalae View MSA
122786233 5272 Eudicot View MSA
122045047 5273 Angiosperm View MSA
121350791 5274 Embryophyte View MSA
123424237 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.902     High  
cufflinks 2.068       Low
cufflinks 4.12        
cufflinks 10.319     High  
cufflinks 1.799       Low
cufflinks 7.789        
cufflinks 12.799     High High
cufflinks 3.375        
cufflinks 9.278        

0 Strain