Gene : Medtr7g094680 M. truncatula Mt4.0v1
Defline:  (1 of 2) KOG3428 - Small nuclear ribonucleoprotein SMD1 and related snRNPs Description:  small nuclear ribonucleoprotein
Genomic Order:  4601 Name:  ? Medtr7g094680
Secondary Identifier:  ? PAC:31078437
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g094680 0.5kb upstream 0.5kb upstream 3389 true chr7: 37777874-37781262 Medicago truncatula
Medtr7g094680 0.5kb upstream 0.5kb upstream 500 false chr7: 37777874-37778373 Medicago truncatula
Medtr7g094680 0.5kb downstream 0.5kb downstream 3389 true chr7: 37778374-37781762 Medicago truncatula
Medtr7g094680 0.5kb downstream 0.5kb downstream 500 false chr7: 37781263-37781762 Medicago truncatula
Medtr7g094680 1.0kb upstream 1.0kb upstream 3889 true chr7: 37777374-37781262 Medicago truncatula
Medtr7g094680 1.0kb upstream 1.0kb upstream 1000 false chr7: 37777374-37778373 Medicago truncatula
Medtr7g094680 1.0kb downstream 1.0kb downstream 3889 true chr7: 37778374-37782262 Medicago truncatula
Medtr7g094680 1.0kb downstream 1.0kb downstream 1000 false chr7: 37781263-37782262 Medicago truncatula
Medtr7g094680 2.0kb upstream 2.0kb upstream 4889 true chr7: 37776374-37781262 Medicago truncatula
Medtr7g094680 2.0kb upstream 2.0kb upstream 2000 false chr7: 37776374-37778373 Medicago truncatula
Medtr7g094680 2.0kb downstream 2.0kb downstream 4889 true chr7: 37778374-37783262 Medicago truncatula
Medtr7g094680 2.0kb downstream 2.0kb downstream 2000 false chr7: 37781263-37783262 Medicago truncatula
Medtr7g094680 5.0kb upstream 5.0kb upstream 7889 true chr7: 37773374-37781262 Medicago truncatula
Medtr7g094680 5.0kb upstream 5.0kb upstream 5000 false chr7: 37773374-37778373 Medicago truncatula
Medtr7g094680 5.0kb downstream 5.0kb downstream 7889 true chr7: 37778374-37786262 Medicago truncatula
Medtr7g094680 5.0kb downstream 5.0kb downstream 5000 false chr7: 37781263-37786262 Medicago truncatula
Medtr7g094680 10.0kb upstream 10.0kb upstream 12889 true chr7: 37768374-37781262 Medicago truncatula
Medtr7g094680 10.0kb upstream 10.0kb upstream 10000 false chr7: 37768374-37778373 Medicago truncatula
Medtr7g094680 10.0kb downstream 10.0kb downstream 12889 true chr7: 37778374-37791262 Medicago truncatula
Medtr7g094680 10.0kb downstream 10.0kb downstream 10000 false chr7: 37781263-37791262 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122288571 5265 Fabidae View MSA
124060560 5270 Rosid View MSA
123750770 5271 Pentapetalae View MSA
122792948 5272 Eudicot View MSA
122045867 5273 Angiosperm View MSA
121351003 5274 Embryophyte View MSA
123426098 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.565     High  
cufflinks 6.715       Low
cufflinks 12.132     High  
cufflinks 45.885     High High
cufflinks 9.385        
cufflinks 80.055     High High
cufflinks 21.403     High  
cufflinks 8.599        
cufflinks 23.472     High  

0 Strain