Gene : Medtr7g117445 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12549//PTHR12549:SF12 - JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN Description:  transcription factor jumonji (JmjC) domain protein
Genomic Order:  6124 Name:  ? Medtr7g117445
Secondary Identifier:  ? PAC:31077156
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g117445 0.5kb upstream 0.5kb upstream 12173 true chr7: 48577550-48589722 Medicago truncatula
Medtr7g117445 0.5kb upstream 0.5kb upstream 500 false chr7: 48589223-48589722 Medicago truncatula
Medtr7g117445 0.5kb downstream 0.5kb downstream 12173 true chr7: 48577050-48589222 Medicago truncatula
Medtr7g117445 0.5kb downstream 0.5kb downstream 500 false chr7: 48577050-48577549 Medicago truncatula
Medtr7g117445 1.0kb upstream 1.0kb upstream 12673 true chr7: 48577550-48590222 Medicago truncatula
Medtr7g117445 1.0kb upstream 1.0kb upstream 1000 false chr7: 48589223-48590222 Medicago truncatula
Medtr7g117445 1.0kb downstream 1.0kb downstream 12673 true chr7: 48576550-48589222 Medicago truncatula
Medtr7g117445 1.0kb downstream 1.0kb downstream 1000 false chr7: 48576550-48577549 Medicago truncatula
Medtr7g117445 2.0kb upstream 2.0kb upstream 13673 true chr7: 48577550-48591222 Medicago truncatula
Medtr7g117445 2.0kb upstream 2.0kb upstream 2000 false chr7: 48589223-48591222 Medicago truncatula
Medtr7g117445 2.0kb downstream 2.0kb downstream 13673 true chr7: 48575550-48589222 Medicago truncatula
Medtr7g117445 2.0kb downstream 2.0kb downstream 2000 false chr7: 48575550-48577549 Medicago truncatula
Medtr7g117445 5.0kb upstream 5.0kb upstream 16673 true chr7: 48577550-48594222 Medicago truncatula
Medtr7g117445 5.0kb upstream 5.0kb upstream 5000 false chr7: 48589223-48594222 Medicago truncatula
Medtr7g117445 5.0kb downstream 5.0kb downstream 16673 true chr7: 48572550-48589222 Medicago truncatula
Medtr7g117445 5.0kb downstream 5.0kb downstream 5000 false chr7: 48572550-48577549 Medicago truncatula
Medtr7g117445 10.0kb upstream 10.0kb upstream 21673 true chr7: 48577550-48599222 Medicago truncatula
Medtr7g117445 10.0kb upstream 10.0kb upstream 10000 false chr7: 48589223-48599222 Medicago truncatula
Medtr7g117445 10.0kb downstream 10.0kb downstream 21673 true chr7: 48567550-48589222 Medicago truncatula
Medtr7g117445 10.0kb downstream 10.0kb downstream 10000 false chr7: 48567550-48577549 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314720 5265 Fabidae View MSA
124073545 5270 Rosid View MSA
123747808 5271 Pentapetalae View MSA
122796242 5272 Eudicot View MSA
122050393 5273 Angiosperm View MSA
121349542 5274 Embryophyte View MSA
123425923 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.707       High
cufflinks 0.569        
cufflinks 0.522        
cufflinks 0.113       Low
cufflinks 0.609        
cufflinks 0.229        
cufflinks 0.356        
cufflinks 0.504        
cufflinks 0.32        

0 Strain